Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC6.27□□□□□ -1.41
Scrt1Q99M85 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Scrt1Q99M85 Platr14-205ENSMUST00000146553 770 ntTSL 2 BASIC6.27□□□□□ -1.41
Scrt1Q99M85 Gm14747-201ENSMUST00000149888 984 ntBASIC6.27□□□□□ -1.41
Scrt1Q99M85 Gm17044-201ENSMUST00000168549 828 ntBASIC6.27□□□□□ -1.41
Scrt1Q99M85 Gm7289-201ENSMUST00000168993 734 ntBASIC6.27□□□□□ -1.41
Scrt1Q99M85 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC6.27□□□□□ -1.41
Scrt1Q99M85 Gm8046-201ENSMUST00000172151 616 ntBASIC6.27□□□□□ -1.41
Scrt1Q99M85 Gm8305-201ENSMUST00000180022 1195 ntBASIC6.27□□□□□ -1.41
Scrt1Q99M85 Gm27014-201ENSMUST00000182658 937 ntBASIC6.27□□□□□ -1.41
Scrt1Q99M85 Gm6931-201ENSMUST00000183103 371 ntBASIC6.27□□□□□ -1.41
Scrt1Q99M85 Gm21614-201ENSMUST00000183260 1005 ntBASIC6.27□□□□□ -1.41
Scrt1Q99M85 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Scrt1Q99M85 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Scrt1Q99M85 Ighv1-14-201ENSMUST00000194015 402 ntBASIC6.27□□□□□ -1.41
Scrt1Q99M85 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Scrt1Q99M85 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC6.27□□□□□ -1.41
Scrt1Q99M85 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC6.27□□□□□ -1.41
Scrt1Q99M85 Gm4751-201ENSMUST00000200620 1105 ntBASIC6.27□□□□□ -1.41
Scrt1Q99M85 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC6.27□□□□□ -1.41
Scrt1Q99M85 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Scrt1Q99M85 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC6.27□□□□□ -1.41
Scrt1Q99M85 AC192091.1-201ENSMUST00000218668 439 ntBASIC6.27□□□□□ -1.41
Scrt1Q99M85 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC6.27□□□□□ -1.41
Scrt1Q99M85 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC6.27□□□□□ -1.41
Scrt1Q99M85 Gm46424-201ENSMUST00000221567 168 ntBASIC6.27□□□□□ -1.41
Scrt1Q99M85 Gm18960-201ENSMUST00000222962 713 ntBASIC6.27□□□□□ -1.41
Scrt1Q99M85 AC153152.2-201ENSMUST00000223165 959 ntBASIC6.27□□□□□ -1.41
Scrt1Q99M85 AC134917.2-201ENSMUST00000223354 124 ntBASIC6.27□□□□□ -1.41
Scrt1Q99M85 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Scrt1Q99M85 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Scrt1Q99M85 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Scrt1Q99M85 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Scrt1Q99M85 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Scrt1Q99M85 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
Scrt1Q99M85 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Scrt1Q99M85 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Scrt1Q99M85 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Scrt1Q99M85 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Scrt1Q99M85 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC6.27□□□□□ -1.41
Scrt1Q99M85 Gm26831-201ENSMUST00000181458 1380 ntBASIC6.27□□□□□ -1.41
Scrt1Q99M85 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Scrt1Q99M85 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Scrt1Q99M85 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Scrt1Q99M85 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Scrt1Q99M85 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Scrt1Q99M85 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
Scrt1Q99M85 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Scrt1Q99M85 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Scrt1Q99M85 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Scrt1Q99M85 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC6.26□□□□□ -1.41
Scrt1Q99M85 Gm20768-201ENSMUST00000199527 2338 ntBASIC6.26□□□□□ -1.41
Scrt1Q99M85 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Scrt1Q99M85 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Scrt1Q99M85 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Scrt1Q99M85 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Scrt1Q99M85 Gm43099-201ENSMUST00000198943 5241 ntBASIC6.26□□□□□ -1.41
Scrt1Q99M85 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Scrt1Q99M85 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Scrt1Q99M85 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Scrt1Q99M85 AI182371-207ENSMUST00000226972 1642 ntAPPRIS ALT2 BASIC6.26□□□□□ -1.41
Scrt1Q99M85 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Scrt1Q99M85 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Scrt1Q99M85 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Scrt1Q99M85 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Scrt1Q99M85 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Scrt1Q99M85 Gm26417-201ENSMUST00000104274 135 ntBASIC6.26□□□□□ -1.41
Scrt1Q99M85 Gm23768-201ENSMUST00000104440 131 ntBASIC6.26□□□□□ -1.41
Scrt1Q99M85 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Scrt1Q99M85 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC6.26□□□□□ -1.41
Scrt1Q99M85 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC6.26□□□□□ -1.41
Scrt1Q99M85 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Scrt1Q99M85 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC6.26□□□□□ -1.41
Scrt1Q99M85 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC6.26□□□□□ -1.41
Scrt1Q99M85 Mir7033-201ENSMUST00000184259 81 ntBASIC6.26□□□□□ -1.41
Scrt1Q99M85 Gm28885-201ENSMUST00000185615 563 ntBASIC6.26□□□□□ -1.41
Scrt1Q99M85 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC6.26□□□□□ -1.41
Scrt1Q99M85 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Scrt1Q99M85 Gm37548-201ENSMUST00000194519 3814 ntBASIC6.26□□□□□ -1.41
Scrt1Q99M85 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Scrt1Q99M85 Gm2860-201ENSMUST00000199226 707 ntBASIC6.26□□□□□ -1.41
Scrt1Q99M85 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC6.26□□□□□ -1.41
Scrt1Q99M85 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC6.26□□□□□ -1.41
Scrt1Q99M85 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Scrt1Q99M85 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC6.26□□□□□ -1.41
Scrt1Q99M85 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC6.26□□□□□ -1.41
Scrt1Q99M85 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC6.26□□□□□ -1.41
Scrt1Q99M85 AC164295.1-201ENSMUST00000224861 186 ntBASIC6.26□□□□□ -1.41
Scrt1Q99M85 AC165155.1-201ENSMUST00000228932 445 ntBASIC6.26□□□□□ -1.41
Scrt1Q99M85 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Scrt1Q99M85 Gm7842-201ENSMUST00000217691 1379 ntBASIC6.26□□□□□ -1.41
Scrt1Q99M85 CT025639.1-201ENSMUST00000223906 1375 ntBASIC6.26□□□□□ -1.41
Scrt1Q99M85 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC6.26□□□□□ -1.41
Scrt1Q99M85 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Scrt1Q99M85 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Scrt1Q99M85 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Scrt1Q99M85 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Scrt1Q99M85 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
Scrt1Q99M85 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Scrt1Q99M85 Gm36908-201ENSMUST00000218080 1662 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms