Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Gm14695-201ENSMUST00000121721 282 ntBASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Gm25435-201ENSMUST00000158277 267 ntBASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Gm6004-201ENSMUST00000173237 1116 ntBASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Gm44809-201ENSMUST00000208305 993 ntBASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Gm5928-201ENSMUST00000221839 466 ntBASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 1700074P13Rik-201ENSMUST00000031935 1647 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Fto-204ENSMUST00000136802 3751 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC6.38□□□□□ -1.39
Col6a6Q8C6K9 A330049N07Rik-203ENSMUST00000220010 1989 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Map3k20-204ENSMUST00000135469 6663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Caps2-201ENSMUST00000092176 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Gm24272-201ENSMUST00000102329 98 ntBASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Mir674-201ENSMUST00000102421 100 ntBASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Gm27152-201ENSMUST00000183828 99 ntBASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Scgb2b33-201ENSMUST00000187413 334 ntBASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Gm8241-201ENSMUST00000189286 816 ntBASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Gm28266-201ENSMUST00000191410 439 ntBASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Gm43382-201ENSMUST00000198954 838 ntBASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Gm44075-201ENSMUST00000204208 216 ntBASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Olfr32-206ENSMUST00000215765 1241 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 AC162934.2-201ENSMUST00000221451 249 ntBASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Gm2840-201ENSMUST00000048361 411 ntBASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Olfr32-201ENSMUST00000099755 1016 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Sim1-201ENSMUST00000020071 7355 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Gm37170-201ENSMUST00000194488 1934 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Dyrk1a-201ENSMUST00000023614 5754 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Pdgfd-201ENSMUST00000058692 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Zfp521-201ENSMUST00000025288 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 6330549D23Rik-203ENSMUST00000160818 3228 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Gm22370-201ENSMUST00000102422 83 ntBASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Gm22024-201ENSMUST00000122733 287 ntBASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Gm12833-201ENSMUST00000136112 477 ntBASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Gm25969-201ENSMUST00000157166 132 ntBASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Gm16557-201ENSMUST00000159182 191 ntBASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Gm3140-201ENSMUST00000163523 481 ntBASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Gm26729-201ENSMUST00000180744 352 ntBASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Gm9274-201ENSMUST00000182505 984 ntBASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Gm7554-201ENSMUST00000202282 574 ntBASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Gm44561-201ENSMUST00000208869 264 ntBASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 CT009713.1-201ENSMUST00000224828 853 ntBASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Krtap26-1-201ENSMUST00000095934 973 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col6a6Q8C6K9 Etl4-205ENSMUST00000114607 3055 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Gm37813-201ENSMUST00000195003 3695 ntBASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Gm37595-201ENSMUST00000192668 1742 ntBASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Gm36120-201ENSMUST00000214393 1734 ntTSL 5 BASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Gm11821-201ENSMUST00000117335 979 ntBASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Gm14865-201ENSMUST00000117523 494 ntBASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Gm12101-201ENSMUST00000121590 390 ntBASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Gm13642-201ENSMUST00000121697 381 ntBASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Gm15300-201ENSMUST00000122324 279 ntBASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Gm12319-201ENSMUST00000131642 357 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Gm17137-202ENSMUST00000165729 957 ntBASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Gm44571-201ENSMUST00000208092 533 ntBASIC6.36□□□□□ -1.39
Col6a6Q8C6K9 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC6.36□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms