Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm45694-201ENSMUST00000212022 3251 ntBASIC9.78□□□□□ -0.84
Trim35Q8C006 Scrn3-201ENSMUST00000090811 3309 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim35Q8C006 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim35Q8C006 Zfp286-201ENSMUST00000054654 3051 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim35Q8C006 Sept14-203ENSMUST00000182386 1642 ntAPPRIS P2 TSL 5 BASIC9.78□□□□□ -0.84
Trim35Q8C006 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trim35Q8C006 Ccdc47-201ENSMUST00000002043 5193 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim35Q8C006 Rufy3-202ENSMUST00000196686 2077 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trim35Q8C006 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trim35Q8C006 Fkbp5-202ENSMUST00000114792 3858 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
Trim35Q8C006 Clcn3-202ENSMUST00000056508 5684 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim35Q8C006 Gm18697-201ENSMUST00000191179 2126 ntBASIC9.77□□□□□ -0.84
Trim35Q8C006 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trim35Q8C006 Katnal2-211ENSMUST00000154665 1515 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Trim35Q8C006 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trim35Q8C006 Cd300a-201ENSMUST00000045151 4633 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trim35Q8C006 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim35Q8C006 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Trim35Q8C006 Prr30-201ENSMUST00000057718 1862 ntAPPRIS P1 TSL 3 BASIC9.77□□□□□ -0.85
Trim35Q8C006 Fancb-203ENSMUST00000167446 2953 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim35Q8C006 Nrip3-202ENSMUST00000041460 3927 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trim35Q8C006 2810471M01Rik-201ENSMUST00000146554 1597 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trim35Q8C006 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trim35Q8C006 Ccna1-201ENSMUST00000029368 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim35Q8C006 Foxp2-205ENSMUST00000115474 2544 ntTSL 5 BASIC9.77□□□□□ -0.85
Trim35Q8C006 Eddm3b-201ENSMUST00000100645 1412 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim35Q8C006 Cflar-201ENSMUST00000069333 3163 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim35Q8C006 Pdgfra-201ENSMUST00000000476 6549 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim35Q8C006 Ighv6-6-201ENSMUST00000103489 357 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Trim35Q8C006 S100a16-205ENSMUST00000107334 879 ntAPPRIS P1 TSL 3 BASIC9.77□□□□□ -0.85
Trim35Q8C006 Scgb1b29-201ENSMUST00000108094 282 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim35Q8C006 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim35Q8C006 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC9.77□□□□□ -0.85
Trim35Q8C006 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC9.77□□□□□ -0.85
Trim35Q8C006 Gm14563-201ENSMUST00000120571 354 ntBASIC9.77□□□□□ -0.85
Trim35Q8C006 Rps9-205ENSMUST00000126562 896 ntTSL 2 BASIC9.77□□□□□ -0.85
Trim35Q8C006 Magea9-ps-201ENSMUST00000140655 732 ntBASIC9.77□□□□□ -0.85
Trim35Q8C006 Gm13898-201ENSMUST00000141865 610 ntBASIC9.77□□□□□ -0.85
Trim35Q8C006 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC9.77□□□□□ -0.85
Trim35Q8C006 6330549D23Rik-202ENSMUST00000159536 1102 ntBASIC9.77□□□□□ -0.85
Trim35Q8C006 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trim35Q8C006 Magea9-ps-202ENSMUST00000167328 899 ntBASIC9.77□□□□□ -0.85
Trim35Q8C006 Mir5624-201ENSMUST00000176635 61 ntBASIC9.77□□□□□ -0.85
Trim35Q8C006 Gm5627-201ENSMUST00000178539 931 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trim35Q8C006 Gm23793-201ENSMUST00000179396 117 ntBASIC9.77□□□□□ -0.85
Trim35Q8C006 Gm6501-201ENSMUST00000187178 916 ntBASIC9.77□□□□□ -0.85
Trim35Q8C006 Gm29561-201ENSMUST00000187838 631 ntTSL 3 BASIC9.77□□□□□ -0.85
Trim35Q8C006 Gm43723-201ENSMUST00000196886 189 ntBASIC9.77□□□□□ -0.85
Trim35Q8C006 Gm43739-201ENSMUST00000198294 307 ntBASIC9.77□□□□□ -0.85
Trim35Q8C006 Gm43117-201ENSMUST00000198531 379 ntBASIC9.77□□□□□ -0.85
Trim35Q8C006 4931431B13Rik-202ENSMUST00000205646 473 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trim35Q8C006 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC9.77□□□□□ -0.85
Trim35Q8C006 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Trim35Q8C006 Gm45402-201ENSMUST00000211796 223 ntBASIC9.77□□□□□ -0.85
Trim35Q8C006 AC132954.2-201ENSMUST00000222400 403 ntBASIC9.77□□□□□ -0.85
Trim35Q8C006 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
Trim35Q8C006 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC9.77□□□□□ -0.85
Trim35Q8C006 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Trim35Q8C006 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim35Q8C006 Gm26063-201ENSMUST00000083378 107 ntBASIC9.77□□□□□ -0.85
Trim35Q8C006 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trim35Q8C006 Tbc1d24-214ENSMUST00000201960 4305 ntTSL 5 BASIC9.77□□□□□ -0.85
Trim35Q8C006 BC030343-201ENSMUST00000199606 2439 ntBASIC9.77□□□□□ -0.85
Trim35Q8C006 Fam187b-201ENSMUST00000058093 1485 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim35Q8C006 Sycp2l-201ENSMUST00000124093 2641 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Trim35Q8C006 Tcf4-201ENSMUST00000066717 4250 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trim35Q8C006 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC9.77□□□□□ -0.85
Trim35Q8C006 Idh3g-201ENSMUST00000052761 1331 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim35Q8C006 Tbx22-202ENSMUST00000118986 3035 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Trim35Q8C006 Aldob-201ENSMUST00000029987 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim35Q8C006 Sptan1-203ENSMUST00000100225 7892 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trim35Q8C006 Lif-201ENSMUST00000040750 3798 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trim35Q8C006 Rnf41-202ENSMUST00000171342 3283 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trim35Q8C006 Ano4-204ENSMUST00000182341 3959 ntAPPRIS P2 TSL 5 BASIC9.76□□□□□ -0.85
Trim35Q8C006 AC156273.1-201ENSMUST00000214570 2762 ntTSL 5 BASIC9.76□□□□□ -0.85
Trim35Q8C006 Tsc1-202ENSMUST00000113867 7682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trim35Q8C006 Tsc1-201ENSMUST00000028155 7674 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trim35Q8C006 Ttll8-201ENSMUST00000109371 2968 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trim35Q8C006 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Trim35Q8C006 Kif28-201ENSMUST00000131716 3526 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Trim35Q8C006 Kif28-203ENSMUST00000221136 3538 ntAPPRIS P5 TSL 5 BASIC9.76□□□□□ -0.85
Trim35Q8C006 Sipa1l1-208ENSMUST00000222298 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trim35Q8C006 Setd7-201ENSMUST00000037141 7411 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trim35Q8C006 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Trim35Q8C006 4933436P19Rik-201ENSMUST00000217736 1442 ntBASIC9.76□□□□□ -0.85
Trim35Q8C006 Ttll7-203ENSMUST00000106134 2664 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Trim35Q8C006 Sec31b-201ENSMUST00000063632 3939 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Trim35Q8C006 C6-203ENSMUST00000162350 2874 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Trim35Q8C006 Nbr1-202ENSMUST00000103098 4654 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trim35Q8C006 Polr3f-202ENSMUST00000110017 1632 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trim35Q8C006 Gm8446-201ENSMUST00000188834 2712 ntBASIC9.76□□□□□ -0.85
Trim35Q8C006 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Trim35Q8C006 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC9.76□□□□□ -0.85
Trim35Q8C006 Rhox4a-201ENSMUST00000115194 925 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trim35Q8C006 Gm12149-201ENSMUST00000117511 654 ntBASIC9.76□□□□□ -0.85
Trim35Q8C006 Gm14774-201ENSMUST00000117857 536 ntBASIC9.76□□□□□ -0.85
Trim35Q8C006 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC9.76□□□□□ -0.85
Trim35Q8C006 Nron-204ENSMUST00000158971 370 ntBASIC9.76□□□□□ -0.85
Trim35Q8C006 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC9.76□□□□□ -0.85
Trim35Q8C006 Gm25451-201ENSMUST00000177832 121 ntBASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms