Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm8192-201ENSMUST00000182196 958 ntBASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Pea15b-201ENSMUST00000182806 387 ntBASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Gm37319-201ENSMUST00000193500 636 ntBASIC7.85□□□□□ -1.15
Usp49Q6P9L4 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Gm43147-201ENSMUST00000196944 542 ntBASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Gm24826-202ENSMUST00000197298 216 ntBASIC7.85□□□□□ -1.15
Usp49Q6P9L4 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Gm19764-201ENSMUST00000203630 649 ntBASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Gm5305-201ENSMUST00000204010 746 ntBASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Gm44565-201ENSMUST00000208194 269 ntBASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Gm8275-201ENSMUST00000219732 424 ntBASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC7.85□□□□□ -1.15
Usp49Q6P9L4 AC133598.4-201ENSMUST00000224577 454 ntBASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Gm6419-201ENSMUST00000097166 429 ntBASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC7.85□□□□□ -1.15
Usp49Q6P9L4 AC135083.2-201ENSMUST00000228599 1456 ntBASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Zfp111-203ENSMUST00000086006 6402 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp49Q6P9L4 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Gm42996-201ENSMUST00000196116 1636 ntBASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Gm18248-201ENSMUST00000191164 1846 ntBASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Usp49Q6P9L4 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp49Q6P9L4 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Usp49Q6P9L4 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp49Q6P9L4 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Usp49Q6P9L4 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Usp49Q6P9L4 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Usp49Q6P9L4 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Usp49Q6P9L4 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp49Q6P9L4 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC7.84□□□□□ -1.15
Usp49Q6P9L4 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Usp49Q6P9L4 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC7.84□□□□□ -1.15
Usp49Q6P9L4 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp49Q6P9L4 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Usp49Q6P9L4 Gm37151-201ENSMUST00000194631 5007 ntBASIC7.84□□□□□ -1.15
Usp49Q6P9L4 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Usp49Q6P9L4 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Usp49Q6P9L4 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Usp49Q6P9L4 Gm22781-201ENSMUST00000104083 137 ntBASIC7.84□□□□□ -1.15
Usp49Q6P9L4 Gm13744-201ENSMUST00000118953 850 ntBASIC7.84□□□□□ -1.15
Usp49Q6P9L4 Gm12601-201ENSMUST00000118994 846 ntBASIC7.84□□□□□ -1.15
Usp49Q6P9L4 Gm14466-201ENSMUST00000119028 451 ntBASIC7.84□□□□□ -1.15
Usp49Q6P9L4 Gm11653-201ENSMUST00000119992 1009 ntBASIC7.84□□□□□ -1.15
Usp49Q6P9L4 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC7.84□□□□□ -1.15
Usp49Q6P9L4 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Usp49Q6P9L4 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC7.84□□□□□ -1.15
Usp49Q6P9L4 Gm23077-201ENSMUST00000157854 116 ntBASIC7.84□□□□□ -1.15
Usp49Q6P9L4 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp49Q6P9L4 Gm6434-201ENSMUST00000163316 372 ntBASIC7.84□□□□□ -1.15
Usp49Q6P9L4 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC7.84□□□□□ -1.15
Usp49Q6P9L4 Gm9381-201ENSMUST00000182285 1012 ntBASIC7.84□□□□□ -1.15
Usp49Q6P9L4 Gm27185-201ENSMUST00000184296 247 ntBASIC7.84□□□□□ -1.15
Usp49Q6P9L4 Ighv8-15-201ENSMUST00000197770 294 ntBASIC7.84□□□□□ -1.15
Usp49Q6P9L4 Gm45042-201ENSMUST00000207377 211 ntBASIC7.84□□□□□ -1.15
Usp49Q6P9L4 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC7.84□□□□□ -1.15
Usp49Q6P9L4 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC7.84□□□□□ -1.15
Usp49Q6P9L4 Gm5080-201ENSMUST00000220341 743 ntBASIC7.84□□□□□ -1.15
Usp49Q6P9L4 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC7.84□□□□□ -1.15
Usp49Q6P9L4 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC7.84□□□□□ -1.15
Usp49Q6P9L4 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Usp49Q6P9L4 AC154640.3-201ENSMUST00000227492 846 ntBASIC7.84□□□□□ -1.15
Usp49Q6P9L4 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Usp49Q6P9L4 n-R5s29-201ENSMUST00000082836 119 ntBASIC7.84□□□□□ -1.15
Usp49Q6P9L4 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp49Q6P9L4 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp49Q6P9L4 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp49Q6P9L4 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp49Q6P9L4 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC7.84□□□□□ -1.15
Usp49Q6P9L4 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Usp49Q6P9L4 Zkscan1-202ENSMUST00000066617 8042 ntTSL 5 BASIC7.84□□□□□ -1.16
Usp49Q6P9L4 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
Usp49Q6P9L4 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC7.84□□□□□ -1.16
Usp49Q6P9L4 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Gm19801-201ENSMUST00000218231 1882 ntBASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Gm15681-201ENSMUST00000137501 2704 ntBASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Gm37090-201ENSMUST00000195694 4105 ntBASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Usp49Q6P9L4 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Usp49Q6P9L4 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms