Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm37863-201ENSMUST00000194911 1457 ntBASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Mir760-201ENSMUST00000103257 119 ntBASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Gm16248-201ENSMUST00000124238 243 ntBASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Gm9672-201ENSMUST00000166437 425 ntBASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Gm21839-201ENSMUST00000179536 378 ntBASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Gm26570-201ENSMUST00000180672 342 ntBASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Mir6908-201ENSMUST00000184056 63 ntBASIC8.38□□□□□ -1.07
Vps54Q5SPW0 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Gm10416-201ENSMUST00000197379 645 ntBASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 AC155709.1-201ENSMUST00000218794 162 ntBASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Gm37410-201ENSMUST00000193623 3039 ntBASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Gm28583-201ENSMUST00000188903 2141 ntBASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Gm44863-201ENSMUST00000207613 1422 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Vps54Q5SPW0 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Olfr466-202ENSMUST00000214214 4192 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm44652-201ENSMUST00000208648 2854 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm43681-201ENSMUST00000201581 1903 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Amy2b-201ENSMUST00000120184 1577 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm14865-201ENSMUST00000117523 494 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm15000-201ENSMUST00000118275 1243 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm14070-201ENSMUST00000120773 428 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm25116-201ENSMUST00000157191 122 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm22604-201ENSMUST00000157604 311 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Mir199b-201ENSMUST00000175066 110 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm27156-201ENSMUST00000184589 754 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm28739-201ENSMUST00000185415 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm28219-201ENSMUST00000185452 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm28542-201ENSMUST00000185545 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm28303-201ENSMUST00000185642 747 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm29244-201ENSMUST00000185825 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm29437-201ENSMUST00000185865 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm29412-201ENSMUST00000185869 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm28910-201ENSMUST00000185921 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm28812-201ENSMUST00000185963 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm29468-201ENSMUST00000185978 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm28335-201ENSMUST00000186204 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm28854-201ENSMUST00000186218 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm28636-201ENSMUST00000186353 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm28452-201ENSMUST00000186623 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm29298-201ENSMUST00000186704 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm28185-201ENSMUST00000186815 694 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm28227-201ENSMUST00000186862 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm28796-201ENSMUST00000186905 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Vps54Q5SPW0 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms