Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Mir674-201ENSMUST00000102421 100 ntBASIC7.62□□□□□ -1.19
NcanP55066 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC7.62□□□□□ -1.19
NcanP55066 Gm22488-201ENSMUST00000116811 127 ntBASIC7.62□□□□□ -1.19
NcanP55066 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC7.62□□□□□ -1.19
NcanP55066 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC7.62□□□□□ -1.19
NcanP55066 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC7.62□□□□□ -1.19
NcanP55066 Gm26323-201ENSMUST00000157743 175 ntBASIC7.62□□□□□ -1.19
NcanP55066 Gm24050-201ENSMUST00000158623 290 ntBASIC7.62□□□□□ -1.19
NcanP55066 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC7.62□□□□□ -1.19
NcanP55066 Gm42673-201ENSMUST00000202676 337 ntBASIC7.62□□□□□ -1.19
NcanP55066 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
NcanP55066 Cd37-208ENSMUST00000210372 960 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NcanP55066 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC7.62□□□□□ -1.19
NcanP55066 AC156950.1-201ENSMUST00000219604 456 ntBASIC7.62□□□□□ -1.19
NcanP55066 n-R5s36-201ENSMUST00000082998 119 ntBASIC7.62□□□□□ -1.19
NcanP55066 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NcanP55066 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NcanP55066 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC7.62□□□□□ -1.19
NcanP55066 Cherp-201ENSMUST00000079510 3713 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
NcanP55066 Gm26888-201ENSMUST00000181119 3683 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NcanP55066 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NcanP55066 Btbd10-202ENSMUST00000117577 2384 ntAPPRIS ALT1 TSL 5 BASIC7.62□□□□□ -1.19
NcanP55066 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NcanP55066 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC7.62□□□□□ -1.19
NcanP55066 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
NcanP55066 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC7.62□□□□□ -1.19
NcanP55066 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NcanP55066 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC7.62□□□□□ -1.19
NcanP55066 Veph1-201ENSMUST00000029419 6431 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NcanP55066 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NcanP55066 Gm26656-201ENSMUST00000181825 2972 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NcanP55066 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC7.62□□□□□ -1.19
NcanP55066 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
NcanP55066 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NcanP55066 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
NcanP55066 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NcanP55066 Mmaa-201ENSMUST00000048718 5650 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NcanP55066 Pik3cg-202ENSMUST00000085469 4584 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NcanP55066 Chid1-207ENSMUST00000153191 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NcanP55066 Gm38302-201ENSMUST00000191676 2076 ntBASIC7.61□□□□□ -1.19
NcanP55066 Gm37595-201ENSMUST00000192668 1742 ntBASIC7.61□□□□□ -1.19
NcanP55066 AC107763.1-202ENSMUST00000225021 2663 ntBASIC7.61□□□□□ -1.19
NcanP55066 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
NcanP55066 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
NcanP55066 Fnbp1-201ENSMUST00000073879 8469 ntTSL 5 BASIC7.61□□□□□ -1.19
NcanP55066 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC7.61□□□□□ -1.19
NcanP55066 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
NcanP55066 Cacna1d-201ENSMUST00000112249 8068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
NcanP55066 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NcanP55066 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NcanP55066 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
NcanP55066 Gm12842-201ENSMUST00000117298 476 ntBASIC7.61□□□□□ -1.19
NcanP55066 Gm13940-201ENSMUST00000121023 301 ntBASIC7.61□□□□□ -1.19
NcanP55066 Gm13642-201ENSMUST00000121697 381 ntBASIC7.61□□□□□ -1.19
NcanP55066 Sms-ps-201ENSMUST00000121773 1101 ntBASIC7.61□□□□□ -1.19
NcanP55066 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NcanP55066 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC7.61□□□□□ -1.19
NcanP55066 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
NcanP55066 Znrf1-210ENSMUST00000173781 337 ntTSL 3 BASIC7.61□□□□□ -1.19
NcanP55066 Gm5345-201ENSMUST00000183076 1014 ntBASIC7.61□□□□□ -1.19
NcanP55066 Gm6693-201ENSMUST00000189583 813 ntBASIC7.61□□□□□ -1.19
NcanP55066 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC7.61□□□□□ -1.19
NcanP55066 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NcanP55066 Gm37809-201ENSMUST00000195050 931 ntBASIC7.61□□□□□ -1.19
NcanP55066 Gm44809-201ENSMUST00000208305 993 ntBASIC7.61□□□□□ -1.19
NcanP55066 AC154219.1-201ENSMUST00000220764 1262 ntBASIC7.61□□□□□ -1.19
NcanP55066 AC107757.1-201ENSMUST00000226780 357 ntBASIC7.61□□□□□ -1.19
NcanP55066 AC122309.1-201ENSMUST00000226945 421 ntBASIC7.61□□□□□ -1.19
NcanP55066 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC7.61□□□□□ -1.19
NcanP55066 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NcanP55066 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NcanP55066 Map3k20-204ENSMUST00000135469 6663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
NcanP55066 Vmn1r40-202ENSMUST00000226925 3011 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
NcanP55066 Hdac4-201ENSMUST00000008995 3937 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NcanP55066 Nemp1-201ENSMUST00000048099 6002 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
NcanP55066 Gpr35-201ENSMUST00000027489 3270 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
NcanP55066 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NcanP55066 Akr1c19-202ENSMUST00000118663 5832 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
NcanP55066 Med12-204ENSMUST00000117706 6940 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
NcanP55066 AC154612.1-202ENSMUST00000224806 1725 ntBASIC7.61□□□□□ -1.19
NcanP55066 Med1-203ENSMUST00000107545 8024 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
NcanP55066 Plec-205ENSMUST00000073418 15455 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
NcanP55066 Sycp1-201ENSMUST00000029448 3437 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NcanP55066 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
NcanP55066 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
NcanP55066 B020014A21Rik-201ENSMUST00000217333 1938 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
NcanP55066 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
NcanP55066 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
NcanP55066 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
NcanP55066 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC7.6□□□□□ -1.19
NcanP55066 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC7.6□□□□□ -1.19
NcanP55066 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC7.6□□□□□ -1.19
NcanP55066 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
NcanP55066 Klhl5-205ENSMUST00000204348 3380 ntTSL 5 BASIC7.6□□□□□ -1.19
NcanP55066 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
NcanP55066 Gm24790-201ENSMUST00000104285 132 ntBASIC7.6□□□□□ -1.19
NcanP55066 Gm15216-201ENSMUST00000118058 277 ntBASIC7.6□□□□□ -1.19
NcanP55066 Gm2986-201ENSMUST00000121603 382 ntBASIC7.6□□□□□ -1.19
NcanP55066 BC064078-201ENSMUST00000122939 570 ntBASIC7.6□□□□□ -1.19
NcanP55066 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms