Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Sf3b3-201ENSMUST00000042012 4525 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LtbrP50284 Gm16233-201ENSMUST00000136170 1623 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LtbrP50284 Gm38910-201ENSMUST00000204630 2448 ntBASIC9.66□□□□□ -0.86
LtbrP50284 Tiam1-201ENSMUST00000002588 7290 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LtbrP50284 Cenpo-205ENSMUST00000140975 4348 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
LtbrP50284 Slit2-208ENSMUST00000173107 9960 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
LtbrP50284 Sycp1-201ENSMUST00000029448 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LtbrP50284 Zmynd8-201ENSMUST00000018050 4130 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
LtbrP50284 Trio-210ENSMUST00000227337 6375 ntBASIC9.66□□□□□ -0.86
LtbrP50284 Morc2b-201ENSMUST00000053896 3712 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LtbrP50284 Abcc9-206ENSMUST00000205202 4752 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
LtbrP50284 Pcyt1a-201ENSMUST00000079791 4789 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LtbrP50284 Kalrn-204ENSMUST00000114949 3618 ntTSL 5 BASIC9.65□□□□□ -0.86
LtbrP50284 Gm40841-202ENSMUST00000222823 3989 ntTSL 5 BASIC9.65□□□□□ -0.86
LtbrP50284 Ston1-205ENSMUST00000150023 3231 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
LtbrP50284 Dubr-205ENSMUST00000191079 2105 ntTSL 2 BASIC9.65□□□□□ -0.86
LtbrP50284 Def8-204ENSMUST00000108830 3191 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
LtbrP50284 Dennd2d-204ENSMUST00000183271 2050 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
LtbrP50284 4930578I07Rik-201ENSMUST00000193416 1372 ntBASIC9.65□□□□□ -0.86
LtbrP50284 Tro-205ENSMUST00000151403 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
LtbrP50284 Selenop-201ENSMUST00000082424 2013 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
LtbrP50284 Slco2b1-203ENSMUST00000107088 4369 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
LtbrP50284 Srp54b-201ENSMUST00000164243 2317 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
LtbrP50284 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
LtbrP50284 Gm10482-202ENSMUST00000189825 2287 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
LtbrP50284 Chrna2-201ENSMUST00000022620 3554 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LtbrP50284 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
LtbrP50284 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
LtbrP50284 Gm12385-201ENSMUST00000117439 795 ntBASIC9.65□□□□□ -0.86
LtbrP50284 Gm11322-201ENSMUST00000118095 435 ntBASIC9.65□□□□□ -0.86
LtbrP50284 Gm13407-201ENSMUST00000118256 360 ntBASIC9.65□□□□□ -0.86
LtbrP50284 Kxd1-203ENSMUST00000118850 992 ntTSL 2 BASIC9.65□□□□□ -0.86
LtbrP50284 Gm13602-201ENSMUST00000122405 493 ntBASIC9.65□□□□□ -0.86
LtbrP50284 Gm23867-201ENSMUST00000122649 274 ntBASIC9.65□□□□□ -0.86
LtbrP50284 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC9.65□□□□□ -0.86
LtbrP50284 Gm4764-201ENSMUST00000130207 1233 ntBASIC9.65□□□□□ -0.86
LtbrP50284 Mllt3-208ENSMUST00000149357 794 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
LtbrP50284 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
LtbrP50284 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC9.65□□□□□ -0.86
LtbrP50284 Gm17137-202ENSMUST00000165729 957 ntBASIC9.65□□□□□ -0.86
LtbrP50284 Gm17129-201ENSMUST00000168168 505 ntBASIC9.65□□□□□ -0.86
LtbrP50284 Gm17572-201ENSMUST00000171455 420 ntBASIC9.65□□□□□ -0.86
LtbrP50284 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC9.65□□□□□ -0.86
LtbrP50284 Gm19200-201ENSMUST00000182579 1001 ntBASIC9.65□□□□□ -0.86
LtbrP50284 Gm9127-201ENSMUST00000188041 985 ntBASIC9.65□□□□□ -0.86
LtbrP50284 Gm28239-201ENSMUST00000190225 447 ntBASIC9.65□□□□□ -0.86
LtbrP50284 Gm29435-201ENSMUST00000191310 689 ntBASIC9.65□□□□□ -0.86
LtbrP50284 Gm36928-201ENSMUST00000192466 694 ntBASIC9.65□□□□□ -0.86
LtbrP50284 Gm37325-201ENSMUST00000194971 694 ntBASIC9.65□□□□□ -0.86
LtbrP50284 Gm18428-201ENSMUST00000194986 791 ntBASIC9.65□□□□□ -0.86
LtbrP50284 D130017N08Rik-204ENSMUST00000199836 506 ntTSL 2 BASIC9.65□□□□□ -0.86
LtbrP50284 Gm45734-201ENSMUST00000211916 411 ntBASIC9.65□□□□□ -0.86
LtbrP50284 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
LtbrP50284 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC9.65□□□□□ -0.86
LtbrP50284 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC9.65□□□□□ -0.86
LtbrP50284 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC9.65□□□□□ -0.86
LtbrP50284 AC165349.2-201ENSMUST00000219097 426 ntBASIC9.65□□□□□ -0.86
LtbrP50284 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC9.65□□□□□ -0.86
LtbrP50284 AC153153.2-201ENSMUST00000223572 411 ntBASIC9.65□□□□□ -0.86
LtbrP50284 AC167019.4-201ENSMUST00000226494 1070 ntBASIC9.65□□□□□ -0.86
LtbrP50284 Timm8b-201ENSMUST00000044051 518 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LtbrP50284 Olfr466-201ENSMUST00000058907 927 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
LtbrP50284 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
LtbrP50284 Gm24522-201ENSMUST00000083964 108 ntBASIC9.65□□□□□ -0.86
LtbrP50284 Gm5446-201ENSMUST00000091762 784 ntBASIC9.65□□□□□ -0.86
LtbrP50284 Ifna4-201ENSMUST00000094973 561 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
LtbrP50284 Olfr628-201ENSMUST00000098193 1553 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
LtbrP50284 Prpf40a-208ENSMUST00000210789 3773 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
LtbrP50284 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
LtbrP50284 Heatr9-201ENSMUST00000019069 1875 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
LtbrP50284 Ddx46-203ENSMUST00000223736 5612 ntAPPRIS P2 BASIC9.65□□□□□ -0.86
LtbrP50284 Rufy3-207ENSMUST00000199312 2182 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
LtbrP50284 Cacna2d4-205ENSMUST00000186622 3710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
LtbrP50284 6430562O15Rik-202ENSMUST00000180808 3997 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
LtbrP50284 Gm18537-202ENSMUST00000206215 1503 ntBASIC9.65□□□□□ -0.86
LtbrP50284 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
LtbrP50284 Gm37821-201ENSMUST00000195476 1843 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
LtbrP50284 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC9.65□□□□□ -0.86
LtbrP50284 Cass4-202ENSMUST00000103073 3600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
LtbrP50284 Gm44317-201ENSMUST00000204314 4214 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
LtbrP50284 Disp2-201ENSMUST00000037547 6626 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
LtbrP50284 Adgrg1-201ENSMUST00000093271 3574 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
LtbrP50284 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
LtbrP50284 Gfpt2-201ENSMUST00000020629 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
LtbrP50284 Gm35572-201ENSMUST00000212427 2310 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
LtbrP50284 Mill2-206ENSMUST00000228493 2043 ntAPPRIS P4 BASIC9.65□□□□□ -0.87
LtbrP50284 Zfp248-201ENSMUST00000069292 3683 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LtbrP50284 Birc6-202ENSMUST00000180037 15768 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
LtbrP50284 Gm28370-201ENSMUST00000185303 3375 ntTSL 5 BASIC9.64□□□□□ -0.87
LtbrP50284 Tespa1-201ENSMUST00000042586 1663 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LtbrP50284 AC156273.1-201ENSMUST00000214570 2762 ntTSL 5 BASIC9.64□□□□□ -0.87
LtbrP50284 Tvp23a-201ENSMUST00000051118 3315 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LtbrP50284 Lgals8-207ENSMUST00000143693 2457 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LtbrP50284 Pot1a-209ENSMUST00000166445 1923 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
LtbrP50284 1600015I10Rik-201ENSMUST00000031837 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LtbrP50284 Erbb4-202ENSMUST00000121473 12037 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
LtbrP50284 Cd300a-201ENSMUST00000045151 4633 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
LtbrP50284 Rbms3-212ENSMUST00000174868 2164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
LtbrP50284 AC154355.1-201ENSMUST00000224604 2162 ntBASIC9.64□□□□□ -0.87
LtbrP50284 Gm33533-201ENSMUST00000193853 1633 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms