Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 AC164567.3-201ENSMUST00000217743 2869 ntBASIC6.6□□□□□ -1.35
Sox6P40645 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC6.6□□□□□ -1.35
Sox6P40645 AC129085.2-201ENSMUST00000223763 2800 ntBASIC6.6□□□□□ -1.35
Sox6P40645 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Sox6P40645 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Sox6P40645 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Sox6P40645 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Sox6P40645 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Sox6P40645 n-R5s72-201ENSMUST00000104518 119 ntBASIC6.6□□□□□ -1.35
Sox6P40645 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC6.6□□□□□ -1.35
Sox6P40645 Rps16-ps2-201ENSMUST00000140155 441 ntBASIC6.6□□□□□ -1.35
Sox6P40645 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC6.6□□□□□ -1.35
Sox6P40645 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC6.6□□□□□ -1.35
Sox6P40645 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC6.6□□□□□ -1.35
Sox6P40645 Gm24011-201ENSMUST00000157732 268 ntBASIC6.6□□□□□ -1.35
Sox6P40645 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sox6P40645 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Sox6P40645 Scnm1-201ENSMUST00000172572 1054 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Sox6P40645 Gm24923-201ENSMUST00000178201 88 ntBASIC6.6□□□□□ -1.35
Sox6P40645 Mir6403-201ENSMUST00000185007 129 ntBASIC6.6□□□□□ -1.35
Sox6P40645 Gm3121-201ENSMUST00000187086 406 ntBASIC6.6□□□□□ -1.35
Sox6P40645 Gm28573-201ENSMUST00000187821 380 ntBASIC6.6□□□□□ -1.35
Sox6P40645 Gm28145-201ENSMUST00000189742 380 ntBASIC6.6□□□□□ -1.35
Sox6P40645 Gm28400-201ENSMUST00000191332 380 ntBASIC6.6□□□□□ -1.35
Sox6P40645 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Sox6P40645 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Sox6P40645 A730082K24Rik-202ENSMUST00000205795 658 ntTSL 3 BASIC6.6□□□□□ -1.35
Sox6P40645 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC6.6□□□□□ -1.35
Sox6P40645 Gm45446-201ENSMUST00000209348 216 ntBASIC6.6□□□□□ -1.35
Sox6P40645 Mplkip-202ENSMUST00000221480 582 ntTSL 5 BASIC6.6□□□□□ -1.35
Sox6P40645 AC118006.3-201ENSMUST00000223948 1176 ntBASIC6.6□□□□□ -1.35
Sox6P40645 A1cf-203ENSMUST00000224400 1204 ntBASIC6.6□□□□□ -1.35
Sox6P40645 AC158981.1-201ENSMUST00000226943 1205 ntBASIC6.6□□□□□ -1.35
Sox6P40645 AC139209.2-201ENSMUST00000227680 1208 ntBASIC6.6□□□□□ -1.35
Sox6P40645 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sox6P40645 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sox6P40645 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Sox6P40645 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Sox6P40645 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sox6P40645 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sox6P40645 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
Sox6P40645 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sox6P40645 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Sox6P40645 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Sox6P40645 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC6.6□□□□□ -1.35
Sox6P40645 Ceacam1-208ENSMUST00000206676 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sox6P40645 AC111010.1-203ENSMUST00000227287 1548 ntBASIC6.6□□□□□ -1.35
Sox6P40645 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sox6P40645 AC163660.4-201ENSMUST00000224983 2171 ntBASIC6.59□□□□□ -1.35
Sox6P40645 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Sox6P40645 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Sox6P40645 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Sox6P40645 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Sox6P40645 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Sox6P40645 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.59□□□□□ -1.35
Sox6P40645 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Sox6P40645 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Sox6P40645 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Sox6P40645 Gm42930-201ENSMUST00000200872 3260 ntBASIC6.59□□□□□ -1.35
Sox6P40645 AC022682.2-202ENSMUST00000224394 3943 ntBASIC6.59□□□□□ -1.35
Sox6P40645 Gm43285-201ENSMUST00000196563 3592 ntBASIC6.59□□□□□ -1.35
Sox6P40645 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Sox6P40645 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC6.59□□□□□ -1.35
Sox6P40645 Gm7129-201ENSMUST00000117402 997 ntBASIC6.59□□□□□ -1.35
Sox6P40645 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC6.59□□□□□ -1.35
Sox6P40645 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Sox6P40645 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC6.59□□□□□ -1.35
Sox6P40645 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC6.59□□□□□ -1.35
Sox6P40645 Gm26182-201ENSMUST00000157688 116 ntBASIC6.59□□□□□ -1.35
Sox6P40645 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC6.59□□□□□ -1.35
Sox6P40645 Gm21040-201ENSMUST00000199493 1132 ntBASIC6.59□□□□□ -1.35
Sox6P40645 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Sox6P40645 Gm45478-201ENSMUST00000209472 211 ntBASIC6.59□□□□□ -1.35
Sox6P40645 Gm18562-201ENSMUST00000209949 915 ntBASIC6.59□□□□□ -1.35
Sox6P40645 AC160338.3-201ENSMUST00000214836 384 ntBASIC6.59□□□□□ -1.35
Sox6P40645 AC102582.1-201ENSMUST00000215376 378 ntBASIC6.59□□□□□ -1.35
Sox6P40645 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC6.59□□□□□ -1.35
Sox6P40645 B230303A05Rik-202ENSMUST00000220728 478 ntBASIC6.59□□□□□ -1.35
Sox6P40645 AC154487.1-201ENSMUST00000224649 226 ntBASIC6.59□□□□□ -1.35
Sox6P40645 AC165154.2-201ENSMUST00000227310 336 ntBASIC6.59□□□□□ -1.35
Sox6P40645 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC6.59□□□□□ -1.35
Sox6P40645 Gm20900-201ENSMUST00000078729 472 ntBASIC6.59□□□□□ -1.35
Sox6P40645 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Sox6P40645 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Sox6P40645 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC6.59□□□□□ -1.35
Sox6P40645 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
Sox6P40645 Gm37254-201ENSMUST00000193542 3901 ntBASIC6.59□□□□□ -1.35
Sox6P40645 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.59□□□□□ -1.35
Sox6P40645 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Sox6P40645 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Sox6P40645 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Sox6P40645 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Sox6P40645 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
Sox6P40645 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC6.58□□□□□ -1.36
Sox6P40645 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Sox6P40645 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Sox6P40645 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Sox6P40645 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Sox6P40645 Gm12181-201ENSMUST00000121448 531 ntBASIC6.58□□□□□ -1.36
Sox6P40645 Gm25178-201ENSMUST00000122633 325 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 106.1 ms