Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC7.01□□□□□ -1.29
BdnfP21237 Gm12599-201ENSMUST00000120534 792 ntBASIC7.01□□□□□ -1.29
BdnfP21237 Gm11343-201ENSMUST00000120579 599 ntBASIC7.01□□□□□ -1.29
BdnfP21237 Gm15079-201ENSMUST00000121943 216 ntBASIC7.01□□□□□ -1.29
BdnfP21237 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC7.01□□□□□ -1.29
BdnfP21237 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
BdnfP21237 Mir1983-201ENSMUST00000157523 132 ntBASIC7.01□□□□□ -1.29
BdnfP21237 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
BdnfP21237 Rpain-210ENSMUST00000167509 519 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
BdnfP21237 Gm17129-201ENSMUST00000168168 505 ntBASIC7.01□□□□□ -1.29
BdnfP21237 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC7.01□□□□□ -1.29
BdnfP21237 Gm7031-201ENSMUST00000173709 919 ntBASIC7.01□□□□□ -1.29
BdnfP21237 Gm37339-201ENSMUST00000194142 392 ntBASIC7.01□□□□□ -1.29
BdnfP21237 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC7.01□□□□□ -1.29
BdnfP21237 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
BdnfP21237 Gm44559-201ENSMUST00000207177 1012 ntBASIC7.01□□□□□ -1.29
BdnfP21237 Gm44691-201ENSMUST00000207562 324 ntTSL 5 BASIC7.01□□□□□ -1.29
BdnfP21237 Gm35501-201ENSMUST00000213492 783 ntTSL 2 BASIC7.01□□□□□ -1.29
BdnfP21237 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC7.01□□□□□ -1.29
BdnfP21237 AC122309.1-201ENSMUST00000226945 421 ntBASIC7.01□□□□□ -1.29
BdnfP21237 4930415O20Rik-201ENSMUST00000023728 558 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
BdnfP21237 1700024P04Rik-201ENSMUST00000054425 481 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
BdnfP21237 Olfr328-201ENSMUST00000073933 933 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
BdnfP21237 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
BdnfP21237 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
BdnfP21237 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
BdnfP21237 Gm37621-201ENSMUST00000194716 5531 ntBASIC7.01□□□□□ -1.29
BdnfP21237 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
BdnfP21237 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
BdnfP21237 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
BdnfP21237 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
BdnfP21237 Gm37310-201ENSMUST00000195237 2968 ntBASIC7.01□□□□□ -1.29
BdnfP21237 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
BdnfP21237 Gm37504-201ENSMUST00000192537 2374 ntBASIC7.01□□□□□ -1.29
BdnfP21237 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
BdnfP21237 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
BdnfP21237 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
BdnfP21237 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
BdnfP21237 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC7□□□□□ -1.29
BdnfP21237 AC124516.1-201ENSMUST00000221845 3544 ntBASIC7□□□□□ -1.29
BdnfP21237 AC156645.1-201ENSMUST00000223066 5194 ntBASIC7□□□□□ -1.29
BdnfP21237 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC7□□□□□ -1.29
BdnfP21237 Gm37079-201ENSMUST00000194114 2135 ntBASIC7□□□□□ -1.29
BdnfP21237 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
BdnfP21237 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC7□□□□□ -1.29
BdnfP21237 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
BdnfP21237 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC7□□□□□ -1.29
BdnfP21237 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC7□□□□□ -1.29
BdnfP21237 Gm36527-201ENSMUST00000195500 3029 ntBASIC7□□□□□ -1.29
BdnfP21237 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC7□□□□□ -1.29
BdnfP21237 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
BdnfP21237 Gm12365-201ENSMUST00000117931 568 ntBASIC7□□□□□ -1.29
BdnfP21237 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC7□□□□□ -1.29
BdnfP21237 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC7□□□□□ -1.29
BdnfP21237 Gm22562-201ENSMUST00000157334 111 ntBASIC7□□□□□ -1.29
BdnfP21237 Gm6428-201ENSMUST00000161062 345 ntBASIC7□□□□□ -1.29
BdnfP21237 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC7□□□□□ -1.29
BdnfP21237 Cldn20-201ENSMUST00000168560 660 ntAPPRIS P1 BASIC7□□□□□ -1.29
BdnfP21237 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC7□□□□□ -1.29
BdnfP21237 Gm3611-201ENSMUST00000173687 877 ntBASIC7□□□□□ -1.29
BdnfP21237 Gm22408-201ENSMUST00000174925 65 ntBASIC7□□□□□ -1.29
BdnfP21237 Gm24576-201ENSMUST00000175508 248 ntBASIC7□□□□□ -1.29
BdnfP21237 Gm8974-201ENSMUST00000175770 479 ntBASIC7□□□□□ -1.29
BdnfP21237 Gm20638-201ENSMUST00000175796 550 ntTSL 5 BASIC7□□□□□ -1.29
BdnfP21237 Gm19815-201ENSMUST00000175818 335 ntBASIC7□□□□□ -1.29
BdnfP21237 Gm20702-201ENSMUST00000176181 460 ntBASIC7□□□□□ -1.29
BdnfP21237 Spp2-202ENSMUST00000176708 710 ntTSL 2 BASIC7□□□□□ -1.29
BdnfP21237 Gm2058-201ENSMUST00000178791 560 ntBASIC7□□□□□ -1.29
BdnfP21237 4930526L06Rik-201ENSMUST00000181137 1022 ntTSL 1 (best) BASIC7□□□□□ -1.29
BdnfP21237 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC7□□□□□ -1.29
BdnfP21237 Gm29739-201ENSMUST00000191760 529 ntBASIC7□□□□□ -1.29
BdnfP21237 Gm37506-201ENSMUST00000192008 143 ntBASIC7□□□□□ -1.29
BdnfP21237 Gm42782-201ENSMUST00000197286 522 ntBASIC7□□□□□ -1.29
BdnfP21237 Gm43699-201ENSMUST00000201312 818 ntTSL 3 BASIC7□□□□□ -1.29
BdnfP21237 Mrps33-204ENSMUST00000201461 717 ntTSL 2 BASIC7□□□□□ -1.29
BdnfP21237 Gm30694-201ENSMUST00000209278 1230 ntBASIC7□□□□□ -1.29
BdnfP21237 AC159886.1-201ENSMUST00000217099 1091 ntBASIC7□□□□□ -1.29
BdnfP21237 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC7□□□□□ -1.29
BdnfP21237 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC7□□□□□ -1.29
BdnfP21237 Vmn1r41-204ENSMUST00000227039 985 ntBASIC7□□□□□ -1.29
BdnfP21237 AC125539.1-201ENSMUST00000227423 622 ntBASIC7□□□□□ -1.29
BdnfP21237 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
BdnfP21237 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
BdnfP21237 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
BdnfP21237 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
BdnfP21237 Olfr888-201ENSMUST00000075228 945 ntBASIC7□□□□□ -1.29
BdnfP21237 H2al1j-201ENSMUST00000091180 330 ntAPPRIS P1 BASIC7□□□□□ -1.29
BdnfP21237 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC7□□□□□ -1.29
BdnfP21237 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
BdnfP21237 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
BdnfP21237 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC7□□□□□ -1.29
BdnfP21237 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC7□□□□□ -1.29
BdnfP21237 Gm43360-201ENSMUST00000197656 2887 ntBASIC7□□□□□ -1.29
BdnfP21237 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
BdnfP21237 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC7□□□□□ -1.29
BdnfP21237 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
BdnfP21237 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
BdnfP21237 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
BdnfP21237 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
BdnfP21237 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms