Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC5.63□□□□□ -1.51
Sdc1P18828 Gm8623-201ENSMUST00000071573 436 ntBASIC5.63□□□□□ -1.51
Sdc1P18828 Gm5321-201ENSMUST00000072050 447 ntBASIC5.63□□□□□ -1.51
Sdc1P18828 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Sdc1P18828 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sdc1P18828 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sdc1P18828 Gm7647-201ENSMUST00000200996 1389 ntBASIC5.63□□□□□ -1.51
Sdc1P18828 Gm45297-201ENSMUST00000209893 3483 ntBASIC5.63□□□□□ -1.51
Sdc1P18828 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sdc1P18828 AC155234.1-201ENSMUST00000225610 2823 ntBASIC5.63□□□□□ -1.51
Sdc1P18828 Gm26561-201ENSMUST00000180743 1413 ntTSL 5 BASIC5.63□□□□□ -1.51
Sdc1P18828 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sdc1P18828 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC5.63□□□□□ -1.51
Sdc1P18828 Wac-202ENSMUST00000092112 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sdc1P18828 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
Sdc1P18828 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sdc1P18828 Gm8257-202ENSMUST00000169583 1749 ntAPPRIS P5 TSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sdc1P18828 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sdc1P18828 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sdc1P18828 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Sdc1P18828 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sdc1P18828 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sdc1P18828 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sdc1P18828 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sdc1P18828 Lrcol1-201ENSMUST00000100924 692 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sdc1P18828 Mir744-201ENSMUST00000103261 100 ntBASIC5.62□□□□□ -1.51
Sdc1P18828 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm15720-201ENSMUST00000117133 282 ntBASIC5.62□□□□□ -1.51
Sdc1P18828 Gm15715-201ENSMUST00000118032 283 ntBASIC5.62□□□□□ -1.51
Sdc1P18828 Gm12604-201ENSMUST00000118382 380 ntBASIC5.62□□□□□ -1.51
Sdc1P18828 Gm5759-201ENSMUST00000119203 811 ntBASIC5.62□□□□□ -1.51
Sdc1P18828 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm13038-201ENSMUST00000119886 459 ntBASIC5.62□□□□□ -1.51
Sdc1P18828 Gm13940-201ENSMUST00000121023 301 ntBASIC5.62□□□□□ -1.51
Sdc1P18828 Gm5931-201ENSMUST00000121308 477 ntBASIC5.62□□□□□ -1.51
Sdc1P18828 Gm15187-201ENSMUST00000122329 264 ntBASIC5.62□□□□□ -1.51
Sdc1P18828 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm16267-201ENSMUST00000140569 732 ntTSL 3 BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm14437-201ENSMUST00000152284 360 ntTSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm25164-201ENSMUST00000158908 116 ntBASIC5.62□□□□□ -1.51
Sdc1P18828 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm4252-201ENSMUST00000174823 313 ntBASIC5.62□□□□□ -1.51
Sdc1P18828 Gm25692-201ENSMUST00000175444 125 ntBASIC5.62□□□□□ -1.51
Sdc1P18828 Gm20614-201ENSMUST00000177106 632 ntBASIC5.62□□□□□ -1.51
Sdc1P18828 Gm25442-201ENSMUST00000177270 92 ntBASIC5.62□□□□□ -1.51
Sdc1P18828 Gm7763-201ENSMUST00000182220 1006 ntBASIC5.62□□□□□ -1.51
Sdc1P18828 Mir7659-201ENSMUST00000184079 58 ntBASIC5.62□□□□□ -1.51
Sdc1P18828 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Sdc1P18828 Mark4-ps-201ENSMUST00000196140 384 ntBASIC5.62□□□□□ -1.51
Sdc1P18828 Gm43390-201ENSMUST00000196614 421 ntBASIC5.62□□□□□ -1.51
Sdc1P18828 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sdc1P18828 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm45155-201ENSMUST00000207365 596 ntTSL 2 BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm44785-201ENSMUST00000207379 620 ntTSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm45481-201ENSMUST00000209717 877 ntBASIC5.62□□□□□ -1.51
Sdc1P18828 Gm9685-201ENSMUST00000211275 538 ntBASIC5.62□□□□□ -1.51
Sdc1P18828 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm34006-201ENSMUST00000213985 655 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm39456-201ENSMUST00000214759 1019 ntTSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm18378-201ENSMUST00000216245 628 ntBASIC5.62□□□□□ -1.51
Sdc1P18828 Gm18591-201ENSMUST00000220568 763 ntBASIC5.62□□□□□ -1.51
Sdc1P18828 AC105950.2-201ENSMUST00000220938 368 ntBASIC5.62□□□□□ -1.51
Sdc1P18828 Gm36758-201ENSMUST00000222594 310 ntBASIC5.62□□□□□ -1.51
Sdc1P18828 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
Sdc1P18828 AC159267.1-201ENSMUST00000226702 678 ntBASIC5.62□□□□□ -1.51
Sdc1P18828 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sdc1P18828 Olfr1055-201ENSMUST00000099894 1182 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sdc1P18828 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sdc1P18828 AC132384.7-201ENSMUST00000220198 1391 ntBASIC5.62□□□□□ -1.51
Sdc1P18828 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sdc1P18828 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sdc1P18828 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms