Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Cdx1P18111 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Cdx1P18111 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Cdx1P18111 Gm42727-201ENSMUST00000202446 2823 ntBASIC5.79□□□□□ -1.48
Cdx1P18111 Znhit3-201ENSMUST00000103195 998 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Cdx1P18111 Gm24284-201ENSMUST00000104240 142 ntBASIC5.79□□□□□ -1.48
Cdx1P18111 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Cdx1P18111 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC5.79□□□□□ -1.48
Cdx1P18111 Gm14099-201ENSMUST00000117769 605 ntBASIC5.79□□□□□ -1.48
Cdx1P18111 Gm8430-201ENSMUST00000119780 471 ntBASIC5.79□□□□□ -1.48
Cdx1P18111 Gm14450-201ENSMUST00000119984 240 ntBASIC5.79□□□□□ -1.48
Cdx1P18111 Gm13358-201ENSMUST00000121427 569 ntBASIC5.79□□□□□ -1.48
Cdx1P18111 Gm12665-201ENSMUST00000126063 541 ntTSL 3 BASIC5.79□□□□□ -1.48
Cdx1P18111 Mllt3-208ENSMUST00000149357 794 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Cdx1P18111 Gm15389-201ENSMUST00000153774 666 ntTSL 3 BASIC5.79□□□□□ -1.48
Cdx1P18111 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Cdx1P18111 Gm3513-201ENSMUST00000161319 637 ntTSL 3 BASIC5.79□□□□□ -1.48
Cdx1P18111 Traj54-201ENSMUST00000165071 54 ntBASIC5.79□□□□□ -1.48
Cdx1P18111 S100a10-203ENSMUST00000170612 477 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Cdx1P18111 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Cdx1P18111 Dxo-208ENSMUST00000174092 738 ntTSL 5 BASIC5.79□□□□□ -1.48
Cdx1P18111 Gm28006-201ENSMUST00000183841 122 ntBASIC5.79□□□□□ -1.48
Cdx1P18111 Gm28114-201ENSMUST00000187232 379 ntBASIC5.79□□□□□ -1.48
Cdx1P18111 Gm28285-204ENSMUST00000187793 601 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
Cdx1P18111 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC5.79□□□□□ -1.48
Cdx1P18111 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Cdx1P18111 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Cdx1P18111 Hax1-204ENSMUST00000197725 648 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Cdx1P18111 Gm44471-201ENSMUST00000197963 100 ntBASIC5.79□□□□□ -1.48
Cdx1P18111 5930435M05Rik-202ENSMUST00000207936 414 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Cdx1P18111 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Cdx1P18111 Gm44743-201ENSMUST00000209062 386 ntBASIC5.79□□□□□ -1.48
Cdx1P18111 AC153943.1-201ENSMUST00000219312 256 ntBASIC5.79□□□□□ -1.48
Cdx1P18111 CT572999.1-201ENSMUST00000220315 1260 ntBASIC5.79□□□□□ -1.48
Cdx1P18111 Gm19047-201ENSMUST00000220922 1099 ntBASIC5.79□□□□□ -1.48
Cdx1P18111 4933409F18Rik-201ENSMUST00000221910 1267 ntTSL 5 BASIC5.79□□□□□ -1.48
Cdx1P18111 AC163041.1-201ENSMUST00000221984 133 ntBASIC5.79□□□□□ -1.48
Cdx1P18111 AC165281.1-201ENSMUST00000225713 1011 ntBASIC5.79□□□□□ -1.48
Cdx1P18111 Krtap3-1-201ENSMUST00000055502 604 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Cdx1P18111 Trex1-201ENSMUST00000061973 1084 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Cdx1P18111 Olfr51-201ENSMUST00000076514 924 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Cdx1P18111 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC5.79□□□□□ -1.48
Cdx1P18111 Gm25587-201ENSMUST00000082498 166 ntBASIC5.79□□□□□ -1.48
Cdx1P18111 Gm43670-201ENSMUST00000199047 1767 ntBASIC5.79□□□□□ -1.48
Cdx1P18111 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Cdx1P18111 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
Cdx1P18111 Zfp964-201ENSMUST00000169125 1416 ntTSL 3 BASIC5.79□□□□□ -1.48
Cdx1P18111 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Cdx1P18111 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Cdx1P18111 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Cdx1P18111 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Cdx1P18111 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Cdx1P18111 Gm28667-201ENSMUST00000189873 2171 ntBASIC5.79□□□□□ -1.48
Cdx1P18111 Gm43880-201ENSMUST00000203635 2162 ntBASIC5.79□□□□□ -1.48
Cdx1P18111 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Cdx1P18111 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Cdx1P18111 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Cdx1P18111 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC5.78□□□□□ -1.48
Cdx1P18111 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
Cdx1P18111 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC5.78□□□□□ -1.48
Cdx1P18111 Gm44661-201ENSMUST00000208830 3503 ntBASIC5.78□□□□□ -1.48
Cdx1P18111 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cdx1P18111 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cdx1P18111 Gm32486-201ENSMUST00000209810 3816 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Cdx1P18111 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cdx1P18111 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cdx1P18111 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cdx1P18111 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Cdx1P18111 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
Cdx1P18111 Mir711-201ENSMUST00000102188 82 ntBASIC5.78□□□□□ -1.48
Cdx1P18111 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Cdx1P18111 Gm17184-201ENSMUST00000111864 462 ntBASIC5.78□□□□□ -1.48
Cdx1P18111 Mageb8-ps-201ENSMUST00000117228 1033 ntBASIC5.78□□□□□ -1.48
Cdx1P18111 Gm15054-201ENSMUST00000117393 281 ntBASIC5.78□□□□□ -1.48
Cdx1P18111 Gm8624-201ENSMUST00000118083 432 ntBASIC5.78□□□□□ -1.48
Cdx1P18111 Gm11907-201ENSMUST00000118918 1007 ntBASIC5.78□□□□□ -1.48
Cdx1P18111 Gm12687-201ENSMUST00000119752 706 ntBASIC5.78□□□□□ -1.48
Cdx1P18111 Gm15574-201ENSMUST00000119937 405 ntBASIC5.78□□□□□ -1.48
Cdx1P18111 Gm12181-201ENSMUST00000121448 531 ntBASIC5.78□□□□□ -1.48
Cdx1P18111 Myl2-201ENSMUST00000014080 662 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cdx1P18111 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Cdx1P18111 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Cdx1P18111 Gm14241-201ENSMUST00000151260 264 ntTSL 5 BASIC5.78□□□□□ -1.48
Cdx1P18111 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC5.78□□□□□ -1.48
Cdx1P18111 Gm22424-201ENSMUST00000158527 87 ntBASIC5.78□□□□□ -1.48
Cdx1P18111 Gm8127-201ENSMUST00000163655 1427 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Cdx1P18111 Mir199b-201ENSMUST00000175066 110 ntBASIC5.78□□□□□ -1.48
Cdx1P18111 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC5.78□□□□□ -1.48
Cdx1P18111 Gm20797-201ENSMUST00000177894 383 ntBASIC5.78□□□□□ -1.48
Cdx1P18111 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC5.78□□□□□ -1.48
Cdx1P18111 Gm28622-201ENSMUST00000189842 507 ntTSL 5 BASIC5.78□□□□□ -1.48
Cdx1P18111 Gm28239-201ENSMUST00000190225 447 ntBASIC5.78□□□□□ -1.48
Cdx1P18111 Gm17530-201ENSMUST00000194336 472 ntBASIC5.78□□□□□ -1.48
Cdx1P18111 Gm37871-201ENSMUST00000194973 688 ntBASIC5.78□□□□□ -1.48
Cdx1P18111 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC5.78□□□□□ -1.48
Cdx1P18111 A930028O11Rik-201ENSMUST00000197219 1108 ntBASIC5.78□□□□□ -1.48
Cdx1P18111 Gm42464-202ENSMUST00000198111 774 ntBASIC5.78□□□□□ -1.48
Cdx1P18111 D130017N08Rik-204ENSMUST00000199836 506 ntTSL 2 BASIC5.78□□□□□ -1.48
Cdx1P18111 Gm18484-201ENSMUST00000204389 991 ntBASIC5.78□□□□□ -1.48
Cdx1P18111 Gm18469-201ENSMUST00000208850 439 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms