Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Hoxc9P09633 Cpb1-201ENSMUST00000011607 2718 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxc9P09633 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxc9P09633 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC9.1□□□□□ -0.95
Hoxc9P09633 Hdlbp-202ENSMUST00000170883 6231 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxc9P09633 Aloxe3-201ENSMUST00000021268 3019 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxc9P09633 Muc6-201ENSMUST00000062451 8650 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Hoxc9P09633 Extl2-203ENSMUST00000106502 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxc9P09633 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxc9P09633 Gm8177-201ENSMUST00000181591 1336 ntBASIC9.1□□□□□ -0.95
Hoxc9P09633 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC9.1□□□□□ -0.95
Hoxc9P09633 Gm37510-201ENSMUST00000194151 4762 ntBASIC9.1□□□□□ -0.95
Hoxc9P09633 Gm13301-201ENSMUST00000121728 2446 ntBASIC9.1□□□□□ -0.95
Hoxc9P09633 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Hoxc9P09633 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxc9P09633 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxc9P09633 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxc9P09633 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxc9P09633 Gm14772-201ENSMUST00000116562 514 ntBASIC9.1□□□□□ -0.95
Hoxc9P09633 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxc9P09633 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC9.1□□□□□ -0.95
Hoxc9P09633 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC9.1□□□□□ -0.95
Hoxc9P09633 Gm7441-201ENSMUST00000220697 1074 ntBASIC9.1□□□□□ -0.95
Hoxc9P09633 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxc9P09633 AC105324.1-201ENSMUST00000227844 386 ntBASIC9.1□□□□□ -0.95
Hoxc9P09633 Mir135a-1-201ENSMUST00000083473 90 ntBASIC9.1□□□□□ -0.95
Hoxc9P09633 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxc9P09633 Oasl2-201ENSMUST00000031542 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxc9P09633 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Hoxc9P09633 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxc9P09633 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC9.1□□□□□ -0.95
Hoxc9P09633 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxc9P09633 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxc9P09633 Nfasc-202ENSMUST00000094569 9739 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxc9P09633 Polr1a-201ENSMUST00000055296 9216 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxc9P09633 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxc9P09633 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxc9P09633 Edar-201ENSMUST00000003312 3637 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxc9P09633 Lca5-201ENSMUST00000034791 4160 ntAPPRIS P4 TSL 1 (best) BASIC9.09□□□□□ -0.95
Hoxc9P09633 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Hoxc9P09633 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Hoxc9P09633 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Hoxc9P09633 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Hoxc9P09633 Kansl1-203ENSMUST00000106971 5222 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Hoxc9P09633 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Hoxc9P09633 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC9.09□□□□□ -0.95
Hoxc9P09633 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Hoxc9P09633 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Hoxc9P09633 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC9.09□□□□□ -0.95
Hoxc9P09633 Gm45191-201ENSMUST00000205846 5439 ntBASIC9.09□□□□□ -0.95
Hoxc9P09633 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Hoxc9P09633 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Hoxc9P09633 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
Hoxc9P09633 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC9.09□□□□□ -0.95
Hoxc9P09633 Gm25435-201ENSMUST00000158277 267 ntBASIC9.09□□□□□ -0.95
Hoxc9P09633 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Hoxc9P09633 Gm9167-201ENSMUST00000182469 962 ntBASIC9.09□□□□□ -0.95
Hoxc9P09633 Gm6074-201ENSMUST00000193340 451 ntBASIC9.09□□□□□ -0.95
Hoxc9P09633 Ighv1-14-201ENSMUST00000194015 402 ntBASIC9.09□□□□□ -0.95
Hoxc9P09633 Gm43576-201ENSMUST00000197937 871 ntBASIC9.09□□□□□ -0.95
Hoxc9P09633 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Hoxc9P09633 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Hoxc9P09633 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Hoxc9P09633 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC9.09□□□□□ -0.95
Hoxc9P09633 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Hoxc9P09633 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Hoxc9P09633 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Hoxc9P09633 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Hoxc9P09633 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Hoxc9P09633 AC155234.1-201ENSMUST00000225610 2823 ntBASIC9.09□□□□□ -0.95
Hoxc9P09633 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Hoxc9P09633 Card6-201ENSMUST00000118365 5995 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Hoxc9P09633 Gm37138-201ENSMUST00000194564 2089 ntBASIC9.09□□□□□ -0.95
Hoxc9P09633 Olfr686-202ENSMUST00000214147 2646 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Hoxc9P09633 Arpp21-202ENSMUST00000070218 3181 ntTSL 5 BASIC9.09□□□□□ -0.95
Hoxc9P09633 Tg-201ENSMUST00000065916 8454 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Hoxc9P09633 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Hoxc9P09633 Nlrp3-201ENSMUST00000079476 3933 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Hoxc9P09633 Gm16638-202ENSMUST00000208892 8508 ntTSL 5 BASIC9.09□□□□□ -0.95
Hoxc9P09633 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Hoxc9P09633 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC9.08□□□□□ -0.96
Hoxc9P09633 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxc9P09633 Gm6117-201ENSMUST00000150540 1333 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxc9P09633 Gm43411-201ENSMUST00000196235 1579 ntBASIC9.08□□□□□ -0.96
Hoxc9P09633 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC9.08□□□□□ -0.96
Hoxc9P09633 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxc9P09633 Olfr523-206ENSMUST00000216023 3940 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Hoxc9P09633 Traf3-202ENSMUST00000060274 6896 ntTSL 5 BASIC9.08□□□□□ -0.96
Hoxc9P09633 Prickle2-203ENSMUST00000113446 7860 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxc9P09633 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxc9P09633 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC9.08□□□□□ -0.96
Hoxc9P09633 C130071C03Rik-201ENSMUST00000131907 3590 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxc9P09633 Gm37785-201ENSMUST00000195783 2408 ntBASIC9.08□□□□□ -0.96
Hoxc9P09633 Gm13462-201ENSMUST00000121472 961 ntBASIC9.08□□□□□ -0.96
Hoxc9P09633 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxc9P09633 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxc9P09633 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxc9P09633 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hoxc9P09633 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC9.08□□□□□ -0.96
Hoxc9P09633 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms