Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm7512-201ENSMUST00000195217 1170 ntBASIC6.94□□□□□ -1.3
Msh4Q99MT2 Gm38170-201ENSMUST00000195404 816 ntBASIC6.94□□□□□ -1.3
Msh4Q99MT2 Gm43037-201ENSMUST00000196808 250 ntBASIC6.94□□□□□ -1.3
Msh4Q99MT2 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC6.94□□□□□ -1.3
Msh4Q99MT2 Gm42581-201ENSMUST00000201774 966 ntBASIC6.94□□□□□ -1.3
Msh4Q99MT2 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC6.94□□□□□ -1.3
Msh4Q99MT2 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC6.94□□□□□ -1.3
Msh4Q99MT2 Gm44590-201ENSMUST00000206161 391 ntBASIC6.94□□□□□ -1.3
Msh4Q99MT2 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC6.94□□□□□ -1.3
Msh4Q99MT2 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC6.94□□□□□ -1.3
Msh4Q99MT2 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC6.94□□□□□ -1.3
Msh4Q99MT2 AC132433.1-201ENSMUST00000221553 1101 ntBASIC6.94□□□□□ -1.3
Msh4Q99MT2 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Msh4Q99MT2 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Msh4Q99MT2 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Msh4Q99MT2 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Msh4Q99MT2 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Msh4Q99MT2 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Msh4Q99MT2 Gm37877-201ENSMUST00000191630 2709 ntBASIC6.94□□□□□ -1.3
Msh4Q99MT2 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Msh4Q99MT2 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC6.94□□□□□ -1.3
Msh4Q99MT2 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
Msh4Q99MT2 Kcne3-203ENSMUST00000178946 1323 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Msh4Q99MT2 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Msh4Q99MT2 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Msh4Q99MT2 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Msh4Q99MT2 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Msh4Q99MT2 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Msh4Q99MT2 CT025639.1-201ENSMUST00000223906 1375 ntBASIC6.94□□□□□ -1.3
Msh4Q99MT2 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC6.94□□□□□ -1.3
Msh4Q99MT2 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Msh4Q99MT2 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC6.93□□□□□ -1.3
Msh4Q99MT2 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC6.93□□□□□ -1.3
Msh4Q99MT2 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Msh4Q99MT2 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
Msh4Q99MT2 Gm37611-201ENSMUST00000195250 2028 ntBASIC6.93□□□□□ -1.3
Msh4Q99MT2 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Msh4Q99MT2 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Msh4Q99MT2 Gm22438-201ENSMUST00000104049 132 ntBASIC6.93□□□□□ -1.3
Msh4Q99MT2 Mir290a-201ENSMUST00000104627 83 ntBASIC6.93□□□□□ -1.3
Msh4Q99MT2 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Msh4Q99MT2 Gm11850-201ENSMUST00000119679 479 ntBASIC6.93□□□□□ -1.3
Msh4Q99MT2 Gm13282-201ENSMUST00000121577 545 ntBASIC6.93□□□□□ -1.3
Msh4Q99MT2 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Msh4Q99MT2 Gm24422-201ENSMUST00000157800 119 ntBASIC6.93□□□□□ -1.3
Msh4Q99MT2 Gm6428-201ENSMUST00000161062 345 ntBASIC6.93□□□□□ -1.3
Msh4Q99MT2 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC6.93□□□□□ -1.3
Msh4Q99MT2 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC6.93□□□□□ -1.3
Msh4Q99MT2 Gm38217-201ENSMUST00000194358 910 ntBASIC6.93□□□□□ -1.3
Msh4Q99MT2 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC6.93□□□□□ -1.3
Msh4Q99MT2 Ighv8-15-201ENSMUST00000197770 294 ntBASIC6.93□□□□□ -1.3
Msh4Q99MT2 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Msh4Q99MT2 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC6.93□□□□□ -1.3
Msh4Q99MT2 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC6.93□□□□□ -1.3
Msh4Q99MT2 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC6.93□□□□□ -1.3
Msh4Q99MT2 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Msh4Q99MT2 Gm45072-201ENSMUST00000208673 929 ntBASIC6.93□□□□□ -1.3
Msh4Q99MT2 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Msh4Q99MT2 Gm18562-201ENSMUST00000209949 915 ntBASIC6.93□□□□□ -1.3
Msh4Q99MT2 Gm7439-201ENSMUST00000214053 835 ntBASIC6.93□□□□□ -1.3
Msh4Q99MT2 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC6.93□□□□□ -1.3
Msh4Q99MT2 AC132384.6-201ENSMUST00000218976 1206 ntBASIC6.93□□□□□ -1.3
Msh4Q99MT2 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Msh4Q99MT2 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC6.93□□□□□ -1.3
Msh4Q99MT2 AL591207.2-201ENSMUST00000222991 337 ntBASIC6.93□□□□□ -1.3
Msh4Q99MT2 AV026068-229ENSMUST00000225516 595 ntBASIC6.93□□□□□ -1.3
Msh4Q99MT2 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Msh4Q99MT2 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Msh4Q99MT2 Gm22504-201ENSMUST00000082963 139 ntBASIC6.93□□□□□ -1.3
Msh4Q99MT2 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Msh4Q99MT2 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Msh4Q99MT2 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Msh4Q99MT2 AC174797.5-201ENSMUST00000225055 1860 ntBASIC6.93□□□□□ -1.3
Msh4Q99MT2 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Msh4Q99MT2 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Msh4Q99MT2 Gm37891-201ENSMUST00000195585 1326 ntBASIC6.93□□□□□ -1.3
Msh4Q99MT2 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Msh4Q99MT2 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Msh4Q99MT2 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Msh4Q99MT2 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Msh4Q99MT2 Gm11853-201ENSMUST00000119687 1384 ntBASIC6.93□□□□□ -1.3
Msh4Q99MT2 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Msh4Q99MT2 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Msh4Q99MT2 Gm43022-201ENSMUST00000197067 4268 ntBASIC6.93□□□□□ -1.3
Msh4Q99MT2 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Msh4Q99MT2 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Msh4Q99MT2 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Msh4Q99MT2 AC124421.1-201ENSMUST00000219114 4154 ntBASIC6.92□□□□□ -1.3
Msh4Q99MT2 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Msh4Q99MT2 Gm37653-201ENSMUST00000195401 3578 ntBASIC6.92□□□□□ -1.3
Msh4Q99MT2 AL450321.1-201ENSMUST00000220600 3550 ntBASIC6.92□□□□□ -1.3
Msh4Q99MT2 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC6.92□□□□□ -1.3
Msh4Q99MT2 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Msh4Q99MT2 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Msh4Q99MT2 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Msh4Q99MT2 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Msh4Q99MT2 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Msh4Q99MT2 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Msh4Q99MT2 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Msh4Q99MT2 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms