Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Clrn1Q8K445 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Clrn1Q8K445 Mageb8-ps-201ENSMUST00000117228 1033 ntBASIC6.93□□□□□ -1.3
Clrn1Q8K445 Gm5752-201ENSMUST00000117771 594 ntBASIC6.93□□□□□ -1.3
Clrn1Q8K445 Gm15576-201ENSMUST00000117806 583 ntBASIC6.93□□□□□ -1.3
Clrn1Q8K445 Gm12465-201ENSMUST00000118591 300 ntBASIC6.93□□□□□ -1.3
Clrn1Q8K445 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Clrn1Q8K445 Gm15188-201ENSMUST00000121264 704 ntBASIC6.93□□□□□ -1.3
Clrn1Q8K445 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Clrn1Q8K445 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Clrn1Q8K445 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC6.93□□□□□ -1.3
Clrn1Q8K445 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Clrn1Q8K445 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Clrn1Q8K445 Gm24685-201ENSMUST00000157764 285 ntBASIC6.93□□□□□ -1.3
Clrn1Q8K445 Gm22948-201ENSMUST00000158561 243 ntBASIC6.93□□□□□ -1.3
Clrn1Q8K445 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Clrn1Q8K445 Gm27458-201ENSMUST00000185108 121 ntBASIC6.93□□□□□ -1.3
Clrn1Q8K445 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Clrn1Q8K445 Olfr318-201ENSMUST00000189911 1026 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Clrn1Q8K445 Gm20915-201ENSMUST00000191575 663 ntBASIC6.93□□□□□ -1.3
Clrn1Q8K445 Gm36945-201ENSMUST00000192040 864 ntTSL 3 BASIC6.93□□□□□ -1.3
Clrn1Q8K445 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC6.93□□□□□ -1.3
Clrn1Q8K445 Gm37977-201ENSMUST00000193096 721 ntBASIC6.93□□□□□ -1.3
Clrn1Q8K445 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC6.93□□□□□ -1.3
Clrn1Q8K445 Gm22149-202ENSMUST00000196259 137 ntBASIC6.93□□□□□ -1.3
Clrn1Q8K445 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Clrn1Q8K445 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC6.93□□□□□ -1.3
Clrn1Q8K445 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC6.93□□□□□ -1.3
Clrn1Q8K445 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC6.93□□□□□ -1.3
Clrn1Q8K445 Gm43905-201ENSMUST00000204516 204 ntBASIC6.93□□□□□ -1.3
Clrn1Q8K445 Gm5586-201ENSMUST00000206264 795 ntBASIC6.93□□□□□ -1.3
Clrn1Q8K445 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Clrn1Q8K445 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Clrn1Q8K445 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC6.93□□□□□ -1.3
Clrn1Q8K445 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Clrn1Q8K445 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
Clrn1Q8K445 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC6.93□□□□□ -1.3
Clrn1Q8K445 AC154461.4-201ENSMUST00000224878 468 ntBASIC6.93□□□□□ -1.3
Clrn1Q8K445 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
Clrn1Q8K445 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Clrn1Q8K445 Olfr1322-201ENSMUST00000070304 933 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Clrn1Q8K445 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Clrn1Q8K445 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Clrn1Q8K445 Defa35-201ENSMUST00000078121 398 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Clrn1Q8K445 n-R5s36-201ENSMUST00000082998 119 ntBASIC6.93□□□□□ -1.3
Clrn1Q8K445 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Clrn1Q8K445 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Clrn1Q8K445 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Clrn1Q8K445 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Clrn1Q8K445 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Clrn1Q8K445 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Clrn1Q8K445 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Clrn1Q8K445 Gm37570-201ENSMUST00000195411 3106 ntBASIC6.93□□□□□ -1.3
Clrn1Q8K445 Stox2-202ENSMUST00000110367 3424 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Clrn1Q8K445 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Clrn1Q8K445 Gm12187-201ENSMUST00000119584 1375 ntBASIC6.93□□□□□ -1.3
Clrn1Q8K445 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Clrn1Q8K445 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Clrn1Q8K445 AC159002.2-201ENSMUST00000228843 4874 ntBASIC6.93□□□□□ -1.3
Clrn1Q8K445 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Clrn1Q8K445 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Clrn1Q8K445 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Clrn1Q8K445 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Clrn1Q8K445 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Clrn1Q8K445 Gm22439-201ENSMUST00000104048 132 ntBASIC6.92□□□□□ -1.3
Clrn1Q8K445 Borcs8-202ENSMUST00000110139 679 ntAPPRIS ALT2 TSL 3 BASIC6.92□□□□□ -1.3
Clrn1Q8K445 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Clrn1Q8K445 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC6.92□□□□□ -1.3
Clrn1Q8K445 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Clrn1Q8K445 Gm13282-201ENSMUST00000121577 545 ntBASIC6.92□□□□□ -1.3
Clrn1Q8K445 Gm14253-201ENSMUST00000122112 639 ntBASIC6.92□□□□□ -1.3
Clrn1Q8K445 Gm24139-201ENSMUST00000122780 288 ntBASIC6.92□□□□□ -1.3
Clrn1Q8K445 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC6.92□□□□□ -1.3
Clrn1Q8K445 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC6.92□□□□□ -1.3
Clrn1Q8K445 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC6.92□□□□□ -1.3
Clrn1Q8K445 Gm22923-201ENSMUST00000174952 110 ntBASIC6.92□□□□□ -1.3
Clrn1Q8K445 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Clrn1Q8K445 Gm29072-201ENSMUST00000191149 678 ntBASIC6.92□□□□□ -1.3
Clrn1Q8K445 Gm18984-201ENSMUST00000193998 1124 ntBASIC6.92□□□□□ -1.3
Clrn1Q8K445 Gm19035-202ENSMUST00000194575 959 ntBASIC6.92□□□□□ -1.3
Clrn1Q8K445 Gm7285-201ENSMUST00000198801 580 ntBASIC6.92□□□□□ -1.3
Clrn1Q8K445 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC6.92□□□□□ -1.3
Clrn1Q8K445 Gm45446-201ENSMUST00000209348 216 ntBASIC6.92□□□□□ -1.3
Clrn1Q8K445 AC127302.1-201ENSMUST00000215973 1111 ntBASIC6.92□□□□□ -1.3
Clrn1Q8K445 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Clrn1Q8K445 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Clrn1Q8K445 AC151904.2-201ENSMUST00000218683 1177 ntBASIC6.92□□□□□ -1.3
Clrn1Q8K445 Gm4928-201ENSMUST00000219622 850 ntBASIC6.92□□□□□ -1.3
Clrn1Q8K445 Gm5791-201ENSMUST00000220840 489 ntBASIC6.92□□□□□ -1.3
Clrn1Q8K445 Gm272-201ENSMUST00000222073 919 ntBASIC6.92□□□□□ -1.3
Clrn1Q8K445 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC6.92□□□□□ -1.3
Clrn1Q8K445 AC146596.1-201ENSMUST00000223507 223 ntBASIC6.92□□□□□ -1.3
Clrn1Q8K445 AC121137.1-201ENSMUST00000225272 602 ntBASIC6.92□□□□□ -1.3
Clrn1Q8K445 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Clrn1Q8K445 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Clrn1Q8K445 BC023105-201ENSMUST00000073997 1227 ntBASIC6.92□□□□□ -1.3
Clrn1Q8K445 Gm6054-201ENSMUST00000078052 378 ntBASIC6.92□□□□□ -1.3
Clrn1Q8K445 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC6.92□□□□□ -1.3
Clrn1Q8K445 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC6.92□□□□□ -1.3
Clrn1Q8K445 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms