Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rab11fip3Q8CHD8 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rab11fip3Q8CHD8 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Rab11fip3Q8CHD8 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Rab11fip3Q8CHD8 AC158537.1-201ENSMUST00000224637 1711 ntBASIC9.36□□□□□ -0.91
Rab11fip3Q8CHD8 AC122769.1-201ENSMUST00000226930 1714 ntBASIC9.36□□□□□ -0.91
Rab11fip3Q8CHD8 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rab11fip3Q8CHD8 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
Rab11fip3Q8CHD8 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rab11fip3Q8CHD8 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC9.36□□□□□ -0.91
Rab11fip3Q8CHD8 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Gm12346-201ENSMUST00000121455 2255 ntBASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Plec-218ENSMUST00000169714 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Plec-201ENSMUST00000023226 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Gm13313-201ENSMUST00000118938 1084 ntBASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Gm26183-201ENSMUST00000157685 139 ntBASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Gm16112-201ENSMUST00000159075 382 ntBASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Zfp572-202ENSMUST00000184208 1078 ntBASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Gm27160-201ENSMUST00000184837 199 ntBASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Gm28929-201ENSMUST00000185330 1193 ntBASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Gm6820-201ENSMUST00000188803 2173 ntBASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Ighv6-2-201ENSMUST00000192430 295 ntBASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Gm18422-201ENSMUST00000203663 1032 ntBASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Gm4585-201ENSMUST00000207218 452 ntBASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Gm44943-201ENSMUST00000207254 300 ntBASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Gm45343-201ENSMUST00000210452 828 ntBASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 AC161275.1-201ENSMUST00000224668 208 ntBASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 AC121137.1-201ENSMUST00000225272 602 ntBASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Gm9800-201ENSMUST00000052615 336 ntBASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Trim66-202ENSMUST00000106739 9250 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 AC159193.3-201ENSMUST00000221902 2622 ntBASIC9.35□□□□□ -0.91
Rab11fip3Q8CHD8 Gm43429-201ENSMUST00000197889 2251 ntBASIC9.34□□□□□ -0.91
Rab11fip3Q8CHD8 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Rab11fip3Q8CHD8 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Rab11fip3Q8CHD8 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Rab11fip3Q8CHD8 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Rab11fip3Q8CHD8 Gm26416-201ENSMUST00000104280 134 ntBASIC9.34□□□□□ -0.91
Rab11fip3Q8CHD8 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Rab11fip3Q8CHD8 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC9.34□□□□□ -0.91
Rab11fip3Q8CHD8 Gm13768-201ENSMUST00000116469 929 ntBASIC9.34□□□□□ -0.91
Rab11fip3Q8CHD8 Gm13732-201ENSMUST00000117753 535 ntBASIC9.34□□□□□ -0.91
Rab11fip3Q8CHD8 Gm7571-201ENSMUST00000120252 927 ntBASIC9.34□□□□□ -0.91
Rab11fip3Q8CHD8 Gm11370-201ENSMUST00000120583 260 ntBASIC9.34□□□□□ -0.91
Rab11fip3Q8CHD8 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Rab11fip3Q8CHD8 Gm25989-201ENSMUST00000158761 133 ntBASIC9.34□□□□□ -0.91
Rab11fip3Q8CHD8 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Rab11fip3Q8CHD8 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC9.34□□□□□ -0.91
Rab11fip3Q8CHD8 Gm43382-201ENSMUST00000198954 838 ntBASIC9.34□□□□□ -0.91
Rab11fip3Q8CHD8 Gm18839-201ENSMUST00000204292 670 ntBASIC9.34□□□□□ -0.91
Rab11fip3Q8CHD8 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Rab11fip3Q8CHD8 Gm30646-201ENSMUST00000207662 180 ntBASIC9.34□□□□□ -0.91
Rab11fip3Q8CHD8 Gm45072-201ENSMUST00000208673 929 ntBASIC9.34□□□□□ -0.91
Rab11fip3Q8CHD8 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC9.34□□□□□ -0.91
Rab11fip3Q8CHD8 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC9.34□□□□□ -0.91
Rab11fip3Q8CHD8 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC9.34□□□□□ -0.91
Rab11fip3Q8CHD8 AC110816.1-201ENSMUST00000218559 980 ntBASIC9.34□□□□□ -0.91
Rab11fip3Q8CHD8 AC155709.1-201ENSMUST00000218794 162 ntBASIC9.34□□□□□ -0.91
Rab11fip3Q8CHD8 AC151904.5-201ENSMUST00000218975 549 ntBASIC9.34□□□□□ -0.91
Rab11fip3Q8CHD8 AC134439.2-201ENSMUST00000221950 467 ntBASIC9.34□□□□□ -0.91
Rab11fip3Q8CHD8 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Rab11fip3Q8CHD8 Gm23054-201ENSMUST00000082804 162 ntBASIC9.34□□□□□ -0.91
Rab11fip3Q8CHD8 Gm5446-201ENSMUST00000091762 784 ntBASIC9.34□□□□□ -0.91
Rab11fip3Q8CHD8 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Rab11fip3Q8CHD8 Olfr12-202ENSMUST00000213247 4158 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Rab11fip3Q8CHD8 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Rab11fip3Q8CHD8 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Rab11fip3Q8CHD8 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Rab11fip3Q8CHD8 AC158605.3-201ENSMUST00000218999 2538 ntBASIC9.34□□□□□ -0.91
Rab11fip3Q8CHD8 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
Rab11fip3Q8CHD8 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
Rab11fip3Q8CHD8 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC9.33□□□□□ -0.92
Rab11fip3Q8CHD8 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms