Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trim35Q8C006 Gm19668-201ENSMUST00000178581 747 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Trim35Q8C006 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC9.79□□□□□ -0.84
Trim35Q8C006 Gm27044-201ENSMUST00000183033 796 ntBASIC9.79□□□□□ -0.84
Trim35Q8C006 2810429I04Rik-204ENSMUST00000185835 923 ntTSL 3 BASIC9.79□□□□□ -0.84
Trim35Q8C006 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC9.79□□□□□ -0.84
Trim35Q8C006 Gm28507-201ENSMUST00000189737 703 ntBASIC9.79□□□□□ -0.84
Trim35Q8C006 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trim35Q8C006 Gm36986-201ENSMUST00000195320 353 ntBASIC9.79□□□□□ -0.84
Trim35Q8C006 Gm45434-201ENSMUST00000210550 293 ntBASIC9.79□□□□□ -0.84
Trim35Q8C006 Gm45527-201ENSMUST00000211052 774 ntBASIC9.79□□□□□ -0.84
Trim35Q8C006 Gm45870-201ENSMUST00000211269 601 ntBASIC9.79□□□□□ -0.84
Trim35Q8C006 AC112956.1-201ENSMUST00000213563 492 ntBASIC9.79□□□□□ -0.84
Trim35Q8C006 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC9.79□□□□□ -0.84
Trim35Q8C006 Gm2696-201ENSMUST00000220062 723 ntAPPRIS P5 BASIC9.79□□□□□ -0.84
Trim35Q8C006 4933409F18Rik-201ENSMUST00000221910 1267 ntTSL 5 BASIC9.79□□□□□ -0.84
Trim35Q8C006 AC126690.1-201ENSMUST00000228898 397 ntBASIC9.79□□□□□ -0.84
Trim35Q8C006 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trim35Q8C006 Gm5341-201ENSMUST00000058881 489 ntBASIC9.79□□□□□ -0.84
Trim35Q8C006 Snord68-201ENSMUST00000082516 86 ntBASIC9.79□□□□□ -0.84
Trim35Q8C006 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC9.79□□□□□ -0.84
Trim35Q8C006 Klf17-201ENSMUST00000062747 2400 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trim35Q8C006 AC117245.3-201ENSMUST00000217495 2176 ntBASIC9.79□□□□□ -0.84
Trim35Q8C006 Gm37233-201ENSMUST00000192173 6263 ntBASIC9.79□□□□□ -0.84
Trim35Q8C006 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Trim35Q8C006 Gm43412-201ENSMUST00000197455 2818 ntBASIC9.79□□□□□ -0.84
Trim35Q8C006 Smoc1-202ENSMUST00000110347 3496 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trim35Q8C006 Cyp2d9-201ENSMUST00000089129 1651 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trim35Q8C006 Rsf1-201ENSMUST00000107153 11124 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Trim35Q8C006 Serpina10-202ENSMUST00000121625 1424 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trim35Q8C006 Slc5a4a-201ENSMUST00000020450 2055 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Trim35Q8C006 Gimap8-203ENSMUST00000203509 3138 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trim35Q8C006 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trim35Q8C006 Clec4f-201ENSMUST00000014686 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trim35Q8C006 Tle3-208ENSMUST00000160882 3523 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trim35Q8C006 Gm17249-201ENSMUST00000181277 3500 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trim35Q8C006 Apol7b-201ENSMUST00000089469 2210 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trim35Q8C006 Gm43288-201ENSMUST00000197594 2628 ntBASIC9.79□□□□□ -0.84
Trim35Q8C006 Gm7646-201ENSMUST00000198590 1346 ntBASIC9.79□□□□□ -0.84
Trim35Q8C006 1700110I01Rik-202ENSMUST00000112812 1737 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trim35Q8C006 Hacl1-214ENSMUST00000167175 1739 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Trim35Q8C006 Gm42680-201ENSMUST00000196238 2500 ntBASIC9.79□□□□□ -0.84
Trim35Q8C006 Car13-201ENSMUST00000029071 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trim35Q8C006 Igsf5-201ENSMUST00000000163 1851 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trim35Q8C006 Ces2a-204ENSMUST00000164182 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trim35Q8C006 Clstn3-201ENSMUST00000008297 4014 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trim35Q8C006 Zfp189-201ENSMUST00000042964 2835 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
Trim35Q8C006 Gm45871-204ENSMUST00000211710 2003 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
Trim35Q8C006 Trerf1-205ENSMUST00000190080 7045 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trim35Q8C006 C330021F23Rik-202ENSMUST00000136592 1621 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim35Q8C006 Eif2d-203ENSMUST00000112446 2153 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim35Q8C006 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trim35Q8C006 Gm28704-201ENSMUST00000186589 2169 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trim35Q8C006 Gm29636-201ENSMUST00000188149 2169 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trim35Q8C006 Gm28839-201ENSMUST00000189579 2171 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trim35Q8C006 Gm29612-201ENSMUST00000191490 2168 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trim35Q8C006 Eif4e2-201ENSMUST00000050876 2869 ntTSL 5 BASIC9.78□□□□□ -0.84
Trim35Q8C006 Cmtr1-201ENSMUST00000024816 6380 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim35Q8C006 Dusp27-201ENSMUST00000085992 4018 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim35Q8C006 Tmem30c-203ENSMUST00000120112 3478 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trim35Q8C006 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
Trim35Q8C006 Cstl1-203ENSMUST00000109955 668 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim35Q8C006 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC9.78□□□□□ -0.84
Trim35Q8C006 Gstm1-202ENSMUST00000126593 828 ntTSL 3 BASIC9.78□□□□□ -0.84
Trim35Q8C006 Gm11715-201ENSMUST00000129501 695 ntTSL 2 BASIC9.78□□□□□ -0.84
Trim35Q8C006 Gm15534-201ENSMUST00000137642 562 ntBASIC9.78□□□□□ -0.84
Trim35Q8C006 Gm16305-201ENSMUST00000140747 556 ntBASIC9.78□□□□□ -0.84
Trim35Q8C006 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trim35Q8C006 1700026D11Rik-205ENSMUST00000151417 789 ntTSL 3 BASIC9.78□□□□□ -0.84
Trim35Q8C006 Gm26174-201ENSMUST00000158415 219 ntBASIC9.78□□□□□ -0.84
Trim35Q8C006 Gm16103-201ENSMUST00000163003 1279 ntBASIC9.78□□□□□ -0.84
Trim35Q8C006 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim35Q8C006 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC9.78□□□□□ -0.84
Trim35Q8C006 Gm26532-201ENSMUST00000180630 690 ntBASIC9.78□□□□□ -0.84
Trim35Q8C006 Gm21733-201ENSMUST00000185670 696 ntBASIC9.78□□□□□ -0.84
Trim35Q8C006 Gm28757-201ENSMUST00000186638 696 ntBASIC9.78□□□□□ -0.84
Trim35Q8C006 Gm21180-201ENSMUST00000187388 696 ntBASIC9.78□□□□□ -0.84
Trim35Q8C006 Gm29002-201ENSMUST00000188301 696 ntBASIC9.78□□□□□ -0.84
Trim35Q8C006 Gm28158-201ENSMUST00000188431 696 ntBASIC9.78□□□□□ -0.84
Trim35Q8C006 Gm21823-201ENSMUST00000189122 696 ntBASIC9.78□□□□□ -0.84
Trim35Q8C006 Gm28618-201ENSMUST00000189283 567 ntBASIC9.78□□□□□ -0.84
Trim35Q8C006 Gm21740-201ENSMUST00000190382 696 ntBASIC9.78□□□□□ -0.84
Trim35Q8C006 Gm21851-201ENSMUST00000190752 696 ntBASIC9.78□□□□□ -0.84
Trim35Q8C006 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC9.78□□□□□ -0.84
Trim35Q8C006 Gm29149-201ENSMUST00000191590 696 ntBASIC9.78□□□□□ -0.84
Trim35Q8C006 Gm37265-201ENSMUST00000191698 885 ntBASIC9.78□□□□□ -0.84
Trim35Q8C006 Gm37442-201ENSMUST00000191915 567 ntBASIC9.78□□□□□ -0.84
Trim35Q8C006 Gm36978-201ENSMUST00000195734 696 ntBASIC9.78□□□□□ -0.84
Trim35Q8C006 Gm42938-201ENSMUST00000198414 1072 ntBASIC9.78□□□□□ -0.84
Trim35Q8C006 Gm43106-201ENSMUST00000199485 637 ntBASIC9.78□□□□□ -0.84
Trim35Q8C006 Gm44580-201ENSMUST00000206333 877 ntBASIC9.78□□□□□ -0.84
Trim35Q8C006 Cryab-206ENSMUST00000217475 1117 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim35Q8C006 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC9.78□□□□□ -0.84
Trim35Q8C006 Pln-205ENSMUST00000219921 531 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
Trim35Q8C006 CT030187.1-201ENSMUST00000220605 252 ntBASIC9.78□□□□□ -0.84
Trim35Q8C006 AC119177.2-201ENSMUST00000226699 629 ntBASIC9.78□□□□□ -0.84
Trim35Q8C006 Slc1a1-201ENSMUST00000025875 3800 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim35Q8C006 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim35Q8C006 Gm10603-201ENSMUST00000183512 2279 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trim35Q8C006 Wfs1-202ENSMUST00000166339 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms