Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Ccdc80-202ENSMUST00000099498 3671 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Prpf38bQ80SY5 Gm3883-201ENSMUST00000098119 3229 ntBASIC8.3□□□□□ -1.08
Prpf38bQ80SY5 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Prpf38bQ80SY5 Tenm4-202ENSMUST00000107165 10930 ntAPPRIS P4 TSL 1 (best) BASIC8.3□□□□□ -1.08
Prpf38bQ80SY5 Gm34730-201ENSMUST00000210674 4077 ntTSL 5 BASIC8.3□□□□□ -1.08
Prpf38bQ80SY5 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Prpf38bQ80SY5 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Prpf38bQ80SY5 Gsdma2-202ENSMUST00000093938 1673 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Prpf38bQ80SY5 Srcap-207ENSMUST00000187040 10654 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
Prpf38bQ80SY5 Fam161b-201ENSMUST00000021659 3357 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Prpf38bQ80SY5 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC8.3□□□□□ -1.08
Prpf38bQ80SY5 Vgll1-203ENSMUST00000114746 2151 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Scn3b-201ENSMUST00000049941 4150 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Hmcn2-201ENSMUST00000113532 15646 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Zfp940-201ENSMUST00000085792 2764 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 AU015836-202ENSMUST00000121565 2997 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Arhgef9-205ENSMUST00000113883 5399 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Umps-201ENSMUST00000023510 3484 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Tbc1d8b-201ENSMUST00000096313 5094 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Acsl1-203ENSMUST00000110372 3429 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Abca1-201ENSMUST00000030010 10262 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Gm23835-201ENSMUST00000104439 132 ntBASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Arhgdib-203ENSMUST00000111892 1153 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Gm16053-201ENSMUST00000120511 188 ntBASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Gm12180-201ENSMUST00000120905 661 ntBASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Gm12807-201ENSMUST00000121546 962 ntBASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Gm22698-201ENSMUST00000175375 108 ntBASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Gm8529-201ENSMUST00000183298 745 ntBASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Gm18301-201ENSMUST00000185261 888 ntBASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Gm18350-201ENSMUST00000187395 955 ntBASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Gm9419-201ENSMUST00000200672 567 ntBASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Gm44722-201ENSMUST00000206473 436 ntBASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Gm45240-201ENSMUST00000211437 674 ntBASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Gm34611-201ENSMUST00000223252 627 ntTSL 5 BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 AC116395.1-201ENSMUST00000225480 1143 ntBASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 AC167192.1-201ENSMUST00000225908 139 ntBASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Cthrc1-204ENSMUST00000226433 596 ntBASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 AC115735.5-201ENSMUST00000228386 397 ntBASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Il1f6-201ENSMUST00000028361 883 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Fgfbp1-201ENSMUST00000061299 1161 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Ldhc-201ENSMUST00000014545 1370 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 B230364G03Rik-201ENSMUST00000181479 1374 ntTSL 2 BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Gm18632-201ENSMUST00000222597 2087 ntBASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Ptchd1-201ENSMUST00000038665 2768 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 D3Ertd751e-207ENSMUST00000146165 3574 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Tbc1d14-215ENSMUST00000146430 4582 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Tbc1d14-201ENSMUST00000031094 4590 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Adgrl2-214ENSMUST00000199238 4670 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Naip1-204ENSMUST00000222155 5361 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Fam102b-201ENSMUST00000046924 5368 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Tnfrsf11b-201ENSMUST00000079772 2818 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Tdgf1-201ENSMUST00000035075 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Lrrc28-201ENSMUST00000032775 1817 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Gm43128-201ENSMUST00000202212 1621 ntBASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Vmn1r37-206ENSMUST00000228791 1617 ntAPPRIS ALT2 BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Lyrm9-203ENSMUST00000147875 8035 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Akap2-207ENSMUST00000107600 7231 ntTSL 2 BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Asb11-202ENSMUST00000036858 1445 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Prpf38bQ80SY5 Adgrf4-204ENSMUST00000170723 2751 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Prpf38bQ80SY5 B130021K23Rik-201ENSMUST00000205226 2593 ntBASIC8.28□□□□□ -1.08
Prpf38bQ80SY5 Gm36952-201ENSMUST00000194923 3625 ntBASIC8.28□□□□□ -1.08
Prpf38bQ80SY5 Usp37-205ENSMUST00000189257 4974 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Prpf38bQ80SY5 Trappc12-202ENSMUST00000168129 3230 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Prpf38bQ80SY5 Gm1976-202ENSMUST00000182639 1853 ntTSL 2 BASIC8.28□□□□□ -1.08
Prpf38bQ80SY5 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC8.28□□□□□ -1.08
Prpf38bQ80SY5 9030624J02Rik-201ENSMUST00000033280 2934 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Prpf38bQ80SY5 Zfp831-201ENSMUST00000059452 9807 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Prpf38bQ80SY5 Gm37675-201ENSMUST00000192303 2847 ntBASIC8.28□□□□□ -1.08
Prpf38bQ80SY5 Olfr923-203ENSMUST00000213619 2846 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Prpf38bQ80SY5 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC8.28□□□□□ -1.08
Prpf38bQ80SY5 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Prpf38bQ80SY5 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Prpf38bQ80SY5 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Prpf38bQ80SY5 Gm11991-201ENSMUST00000119652 1074 ntBASIC8.28□□□□□ -1.08
Prpf38bQ80SY5 Gm11945-201ENSMUST00000120551 476 ntBASIC8.28□□□□□ -1.08
Prpf38bQ80SY5 Gm13633-201ENSMUST00000120668 898 ntBASIC8.28□□□□□ -1.08
Prpf38bQ80SY5 Gm7746-201ENSMUST00000120966 503 ntBASIC8.28□□□□□ -1.08
Prpf38bQ80SY5 Gm14122-201ENSMUST00000122076 973 ntBASIC8.28□□□□□ -1.08
Prpf38bQ80SY5 A630023P12Rik-201ENSMUST00000129007 1221 ntTSL 2 BASIC8.28□□□□□ -1.08
Prpf38bQ80SY5 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC8.28□□□□□ -1.08
Prpf38bQ80SY5 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Prpf38bQ80SY5 Mllt3-208ENSMUST00000149357 794 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 101.4 ms