Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC7.88□□□□□ -1.15
Usp49Q6P9L4 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Usp49Q6P9L4 Gm18632-201ENSMUST00000222597 2087 ntBASIC7.88□□□□□ -1.15
Usp49Q6P9L4 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Usp49Q6P9L4 Muc19-202ENSMUST00000160242 9104 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Usp49Q6P9L4 Gm42885-201ENSMUST00000200763 4214 ntBASIC7.88□□□□□ -1.15
Usp49Q6P9L4 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Usp49Q6P9L4 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Usp49Q6P9L4 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Usp49Q6P9L4 Ryr2-202ENSMUST00000170156 16813 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Usp49Q6P9L4 Ryr2-201ENSMUST00000021750 16814 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Usp49Q6P9L4 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Usp49Q6P9L4 Gm13106-201ENSMUST00000119045 1443 ntBASIC7.87□□□□□ -1.15
Usp49Q6P9L4 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Usp49Q6P9L4 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Usp49Q6P9L4 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Usp49Q6P9L4 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
Usp49Q6P9L4 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Usp49Q6P9L4 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
Usp49Q6P9L4 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Usp49Q6P9L4 Gm10307-201ENSMUST00000189839 1337 ntBASIC7.87□□□□□ -1.15
Usp49Q6P9L4 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Usp49Q6P9L4 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Usp49Q6P9L4 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Usp49Q6P9L4 Mir697-201ENSMUST00000102316 109 ntBASIC7.87□□□□□ -1.15
Usp49Q6P9L4 Serpina3h-202ENSMUST00000116393 1226 ntBASIC7.87□□□□□ -1.15
Usp49Q6P9L4 Gm13196-201ENSMUST00000118297 379 ntBASIC7.87□□□□□ -1.15
Usp49Q6P9L4 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Usp49Q6P9L4 Gm16248-201ENSMUST00000124238 243 ntBASIC7.87□□□□□ -1.15
Usp49Q6P9L4 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC7.87□□□□□ -1.15
Usp49Q6P9L4 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Usp49Q6P9L4 Gm27001-201ENSMUST00000182252 936 ntBASIC7.87□□□□□ -1.15
Usp49Q6P9L4 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC7.87□□□□□ -1.15
Usp49Q6P9L4 Gm43595-201ENSMUST00000196464 1071 ntBASIC7.87□□□□□ -1.15
Usp49Q6P9L4 Gm42580-201ENSMUST00000197223 753 ntBASIC7.87□□□□□ -1.15
Usp49Q6P9L4 Gm30646-201ENSMUST00000207662 180 ntBASIC7.87□□□□□ -1.15
Usp49Q6P9L4 Gm45739-201ENSMUST00000213094 388 ntBASIC7.87□□□□□ -1.15
Usp49Q6P9L4 Gm46424-201ENSMUST00000221567 168 ntBASIC7.87□□□□□ -1.15
Usp49Q6P9L4 AC154361.1-201ENSMUST00000225694 745 ntBASIC7.87□□□□□ -1.15
Usp49Q6P9L4 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Usp49Q6P9L4 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC7.87□□□□□ -1.15
Usp49Q6P9L4 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
Usp49Q6P9L4 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Usp49Q6P9L4 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Usp49Q6P9L4 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Usp49Q6P9L4 Gm5361-201ENSMUST00000211041 1498 ntBASIC7.87□□□□□ -1.15
Usp49Q6P9L4 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Usp49Q6P9L4 Gm42462-201ENSMUST00000196543 1363 ntBASIC7.86□□□□□ -1.15
Usp49Q6P9L4 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Usp49Q6P9L4 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC7.86□□□□□ -1.15
Usp49Q6P9L4 Gm16204-201ENSMUST00000117864 1897 ntBASIC7.86□□□□□ -1.15
Usp49Q6P9L4 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Usp49Q6P9L4 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Usp49Q6P9L4 Gm12635-201ENSMUST00000117285 752 ntBASIC7.86□□□□□ -1.15
Usp49Q6P9L4 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC7.86□□□□□ -1.15
Usp49Q6P9L4 Gm4887-201ENSMUST00000122230 1053 ntBASIC7.86□□□□□ -1.15
Usp49Q6P9L4 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
Usp49Q6P9L4 Gm21839-201ENSMUST00000179536 378 ntBASIC7.86□□□□□ -1.15
Usp49Q6P9L4 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC7.86□□□□□ -1.15
Usp49Q6P9L4 Gm8539-201ENSMUST00000199822 501 ntBASIC7.86□□□□□ -1.15
Usp49Q6P9L4 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
Usp49Q6P9L4 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Usp49Q6P9L4 Gm5119-201ENSMUST00000215858 634 ntBASIC7.86□□□□□ -1.15
Usp49Q6P9L4 Gm6667-201ENSMUST00000217169 564 ntBASIC7.86□□□□□ -1.15
Usp49Q6P9L4 AL837512.1-201ENSMUST00000223914 1073 ntBASIC7.86□□□□□ -1.15
Usp49Q6P9L4 AC121542.2-201ENSMUST00000227529 400 ntBASIC7.86□□□□□ -1.15
Usp49Q6P9L4 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Usp49Q6P9L4 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Usp49Q6P9L4 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Usp49Q6P9L4 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Usp49Q6P9L4 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Usp49Q6P9L4 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Usp49Q6P9L4 Akt3-201ENSMUST00000019843 1511 ntTSL 5 BASIC7.86□□□□□ -1.15
Usp49Q6P9L4 Gm43181-201ENSMUST00000197001 2072 ntBASIC7.86□□□□□ -1.15
Usp49Q6P9L4 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Usp49Q6P9L4 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Usp49Q6P9L4 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
Usp49Q6P9L4 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Usp49Q6P9L4 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Usp49Q6P9L4 AC164437.5-201ENSMUST00000227235 4414 ntBASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC7.85□□□□□ -1.15
Usp49Q6P9L4 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp49Q6P9L4 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC7.85□□□□□ -1.15
Usp49Q6P9L4 AC138765.2-202ENSMUST00000228418 3435 ntBASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Gm22231-201ENSMUST00000101027 73 ntBASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Gm26417-201ENSMUST00000104274 135 ntBASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Gm12879-201ENSMUST00000120003 1182 ntBASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Gm14603-201ENSMUST00000121275 448 ntBASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Gm14612-201ENSMUST00000121522 881 ntBASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Gm22702-201ENSMUST00000175372 69 ntBASIC7.85□□□□□ -1.15
Usp49Q6P9L4 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC7.85□□□□□ -1.15
Usp49Q6P9L4 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms