Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm24157-201ENSMUST00000175265 111 ntBASIC6.55□□□□□ -1.36
Col8a1Q00780 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC6.55□□□□□ -1.36
Col8a1Q00780 Gm23018-201ENSMUST00000177928 109 ntBASIC6.55□□□□□ -1.36
Col8a1Q00780 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Col8a1Q00780 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col8a1Q00780 Gm9142-201ENSMUST00000187161 955 ntBASIC6.55□□□□□ -1.36
Col8a1Q00780 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC6.55□□□□□ -1.36
Col8a1Q00780 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC6.55□□□□□ -1.36
Col8a1Q00780 Gm5539-201ENSMUST00000192177 966 ntBASIC6.55□□□□□ -1.36
Col8a1Q00780 Mir703-201ENSMUST00000197105 109 ntBASIC6.55□□□□□ -1.36
Col8a1Q00780 Gm43396-201ENSMUST00000197506 706 ntBASIC6.55□□□□□ -1.36
Col8a1Q00780 AC151967.1-201ENSMUST00000198146 76 ntBASIC6.55□□□□□ -1.36
Col8a1Q00780 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC6.55□□□□□ -1.36
Col8a1Q00780 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col8a1Q00780 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC6.55□□□□□ -1.36
Col8a1Q00780 Gm4585-201ENSMUST00000207218 452 ntBASIC6.55□□□□□ -1.36
Col8a1Q00780 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC6.55□□□□□ -1.36
Col8a1Q00780 Gm8489-201ENSMUST00000209876 1152 ntBASIC6.55□□□□□ -1.36
Col8a1Q00780 Gm45458-201ENSMUST00000209900 522 ntBASIC6.55□□□□□ -1.36
Col8a1Q00780 Gm18160-201ENSMUST00000214279 827 ntBASIC6.55□□□□□ -1.36
Col8a1Q00780 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Col8a1Q00780 AL929285.1-201ENSMUST00000215522 229 ntBASIC6.55□□□□□ -1.36
Col8a1Q00780 Gm18705-201ENSMUST00000215985 913 ntBASIC6.55□□□□□ -1.36
Col8a1Q00780 Gm18899-201ENSMUST00000217663 546 ntBASIC6.55□□□□□ -1.36
Col8a1Q00780 AC151904.2-201ENSMUST00000218683 1177 ntBASIC6.55□□□□□ -1.36
Col8a1Q00780 AC192616.1-201ENSMUST00000221922 132 ntBASIC6.55□□□□□ -1.36
Col8a1Q00780 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col8a1Q00780 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC6.55□□□□□ -1.36
Col8a1Q00780 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Col8a1Q00780 AC124709.1-201ENSMUST00000227296 620 ntBASIC6.55□□□□□ -1.36
Col8a1Q00780 AC133203.1-201ENSMUST00000228241 301 ntBASIC6.55□□□□□ -1.36
Col8a1Q00780 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col8a1Q00780 Gm25799-201ENSMUST00000082643 107 ntBASIC6.55□□□□□ -1.36
Col8a1Q00780 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col8a1Q00780 Krtap26-1-201ENSMUST00000095934 973 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Col8a1Q00780 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Col8a1Q00780 Gm37060-201ENSMUST00000194997 2397 ntBASIC6.55□□□□□ -1.36
Col8a1Q00780 CT571245.1-201ENSMUST00000218642 3465 ntBASIC6.55□□□□□ -1.36
Col8a1Q00780 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col8a1Q00780 Chn2-202ENSMUST00000067741 2983 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col8a1Q00780 4921517D22Rik-201ENSMUST00000061597 3149 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col8a1Q00780 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col8a1Q00780 Gbp8-201ENSMUST00000031235 2459 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Col8a1Q00780 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col8a1Q00780 Adhfe1-203ENSMUST00000144177 3239 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col8a1Q00780 Trappc12-202ENSMUST00000168129 3230 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col8a1Q00780 Lrrc29-204ENSMUST00000210801 3830 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col8a1Q00780 Flrt3-202ENSMUST00000110057 3977 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col8a1Q00780 B430306N03Rik-201ENSMUST00000049614 3996 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col8a1Q00780 AC169038.1-201ENSMUST00000227378 1352 ntBASIC6.55□□□□□ -1.36
Col8a1Q00780 A330015K06Rik-201ENSMUST00000195489 4286 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col8a1Q00780 Dubr-205ENSMUST00000191079 2105 ntTSL 2 BASIC6.55□□□□□ -1.36
Col8a1Q00780 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col8a1Q00780 Cd36-206ENSMUST00000197890 2564 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col8a1Q00780 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col8a1Q00780 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Col8a1Q00780 Gm45629-201ENSMUST00000209629 2546 ntBASIC6.54□□□□□ -1.36
Col8a1Q00780 5430420F09Rik-201ENSMUST00000194956 1799 ntBASIC6.54□□□□□ -1.36
Col8a1Q00780 Gm42996-201ENSMUST00000196116 1636 ntBASIC6.54□□□□□ -1.36
Col8a1Q00780 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
Col8a1Q00780 Gm5715-201ENSMUST00000196854 1465 ntBASIC6.54□□□□□ -1.36
Col8a1Q00780 Met-201ENSMUST00000080469 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col8a1Q00780 Ipcef1-201ENSMUST00000078070 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col8a1Q00780 Ppwd1-201ENSMUST00000022226 2342 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col8a1Q00780 Etv5-203ENSMUST00000168774 3773 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col8a1Q00780 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col8a1Q00780 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col8a1Q00780 Zfp961-201ENSMUST00000109997 2713 ntAPPRIS P2 TSL 2 BASIC6.54□□□□□ -1.36
Col8a1Q00780 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col8a1Q00780 Serpina1a-201ENSMUST00000072876 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col8a1Q00780 Oacyl-201ENSMUST00000115097 3431 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col8a1Q00780 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC6.54□□□□□ -1.36
Col8a1Q00780 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col8a1Q00780 Gm22671-201ENSMUST00000104420 134 ntBASIC6.54□□□□□ -1.36
Col8a1Q00780 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Col8a1Q00780 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Col8a1Q00780 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Col8a1Q00780 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Col8a1Q00780 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Col8a1Q00780 Gm6743-201ENSMUST00000117345 1066 ntBASIC6.54□□□□□ -1.36
Col8a1Q00780 Gm12851-201ENSMUST00000117920 421 ntBASIC6.54□□□□□ -1.36
Col8a1Q00780 Gm14335-201ENSMUST00000119165 810 ntBASIC6.54□□□□□ -1.36
Col8a1Q00780 Gm12804-201ENSMUST00000121030 999 ntBASIC6.54□□□□□ -1.36
Col8a1Q00780 Gm12455-201ENSMUST00000121242 416 ntBASIC6.54□□□□□ -1.36
Col8a1Q00780 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC6.54□□□□□ -1.36
Col8a1Q00780 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC6.54□□□□□ -1.36
Col8a1Q00780 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col8a1Q00780 Gm16357-201ENSMUST00000144091 474 ntBASIC6.54□□□□□ -1.36
Col8a1Q00780 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col8a1Q00780 Gm16558-201ENSMUST00000163015 532 ntBASIC6.54□□□□□ -1.36
Col8a1Q00780 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Col8a1Q00780 Gm2966-201ENSMUST00000166052 481 ntBASIC6.54□□□□□ -1.36
Col8a1Q00780 Gm17204-201ENSMUST00000167936 478 ntBASIC6.54□□□□□ -1.36
Col8a1Q00780 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Col8a1Q00780 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Col8a1Q00780 Gm24925-201ENSMUST00000178157 107 ntBASIC6.54□□□□□ -1.36
Col8a1Q00780 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC6.54□□□□□ -1.36
Col8a1Q00780 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC6.54□□□□□ -1.36
Col8a1Q00780 Gm8151-201ENSMUST00000184817 871 ntBASIC6.54□□□□□ -1.36
Col8a1Q00780 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms