Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm28122-201ENSMUST00000187088 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm28150-201ENSMUST00000187305 614 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm28420-201ENSMUST00000187340 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm28106-201ENSMUST00000187640 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm28698-201ENSMUST00000187734 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm29224-201ENSMUST00000187965 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm29189-201ENSMUST00000188018 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm29476-201ENSMUST00000188397 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm29505-201ENSMUST00000188424 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm28125-201ENSMUST00000188470 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm29391-201ENSMUST00000188545 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm29280-201ENSMUST00000188571 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm28349-201ENSMUST00000188590 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm29652-201ENSMUST00000188622 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm28819-206ENSMUST00000188816 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm29079-201ENSMUST00000188875 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm28213-201ENSMUST00000189183 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm29382-201ENSMUST00000189549 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm29377-205ENSMUST00000189603 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm28327-201ENSMUST00000189638 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm28790-201ENSMUST00000189642 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm28377-201ENSMUST00000189695 720 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm28907-201ENSMUST00000189700 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm29586-207ENSMUST00000189745 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm29115-201ENSMUST00000189870 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm28366-201ENSMUST00000190147 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm29212-201ENSMUST00000190384 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm29533-201ENSMUST00000190403 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm28162-201ENSMUST00000190545 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm29030-201ENSMUST00000190848 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm28742-201ENSMUST00000191001 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm28899-201ENSMUST00000191161 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm29567-201ENSMUST00000191188 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm28222-201ENSMUST00000191210 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm28776-201ENSMUST00000191282 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm29306-201ENSMUST00000191366 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm29618-201ENSMUST00000191423 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm28136-210ENSMUST00000191432 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm29251-201ENSMUST00000191480 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm28658-201ENSMUST00000191532 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm37383-201ENSMUST00000191750 745 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm32180-201ENSMUST00000192415 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm30598-201ENSMUST00000192620 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm37627-201ENSMUST00000194585 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm34274-201ENSMUST00000195825 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm18943-201ENSMUST00000207357 1216 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm9267-201ENSMUST00000222831 404 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm6327-201ENSMUST00000171185 1335 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm42771-201ENSMUST00000198342 2486 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nkx3-1P97436 AC122769.1-201ENSMUST00000226930 1714 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nkx3-1P97436 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Gm44797-201ENSMUST00000208780 1837 ntBASIC6.18□□□□□ -1.42
Nkx3-1P97436 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms