Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb1P63158 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC8.18□□□□□ -1.1
Hmgb1P63158 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Hmgb1P63158 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Hmgb1P63158 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC8.18□□□□□ -1.1
Hmgb1P63158 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Hmgb1P63158 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Hmgb1P63158 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Hmgb1P63158 Gm36981-201ENSMUST00000192340 4485 ntBASIC8.18□□□□□ -1.1
Hmgb1P63158 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Hmgb1P63158 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Hmgb1P63158 Gm38147-201ENSMUST00000192397 1798 ntBASIC8.18□□□□□ -1.1
Hmgb1P63158 AC121844.3-201ENSMUST00000219124 1785 ntBASIC8.18□□□□□ -1.1
Hmgb1P63158 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Hmgb1P63158 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Hmgb1P63158 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Hmgb1P63158 Gm13929-201ENSMUST00000117553 1125 ntBASIC8.18□□□□□ -1.1
Hmgb1P63158 Gm15366-201ENSMUST00000118433 1019 ntBASIC8.18□□□□□ -1.1
Hmgb1P63158 Gm14876-201ENSMUST00000120795 327 ntBASIC8.18□□□□□ -1.1
Hmgb1P63158 Rps16-ps2-201ENSMUST00000140155 441 ntBASIC8.18□□□□□ -1.1
Hmgb1P63158 Gm7763-201ENSMUST00000182220 1006 ntBASIC8.18□□□□□ -1.1
Hmgb1P63158 1600019K03Rik-201ENSMUST00000187829 477 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Hmgb1P63158 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC8.18□□□□□ -1.1
Hmgb1P63158 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Hmgb1P63158 Gm28060-201ENSMUST00000191554 189 ntBASIC8.18□□□□□ -1.1
Hmgb1P63158 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC8.18□□□□□ -1.1
Hmgb1P63158 Mir1897-202ENSMUST00000198006 79 ntBASIC8.18□□□□□ -1.1
Hmgb1P63158 Gm18690-201ENSMUST00000204488 985 ntBASIC8.18□□□□□ -1.1
Hmgb1P63158 Gm5668-201ENSMUST00000220897 436 ntBASIC8.18□□□□□ -1.1
Hmgb1P63158 Tmem216-201ENSMUST00000025569 1101 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Hmgb1P63158 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Hmgb1P63158 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Hmgb1P63158 4930433N12Rik-201ENSMUST00000048921 1204 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Hmgb1P63158 Olfr402-201ENSMUST00000073675 1012 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Hmgb1P63158 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC8.18□□□□□ -1.1
Hmgb1P63158 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Hmgb1P63158 Gm25926-201ENSMUST00000082899 160 ntBASIC8.18□□□□□ -1.1
Hmgb1P63158 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Hmgb1P63158 Gm38244-201ENSMUST00000191737 2586 ntBASIC8.18□□□□□ -1.1
Hmgb1P63158 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Hmgb1P63158 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Hmgb1P63158 Gm37372-201ENSMUST00000193577 3311 ntBASIC8.18□□□□□ -1.1
Hmgb1P63158 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Hmgb1P63158 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Hmgb1P63158 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Hmgb1P63158 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Hmgb1P63158 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Hmgb1P63158 AC135083.2-201ENSMUST00000228599 1456 ntBASIC8.18□□□□□ -1.1
Hmgb1P63158 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Hmgb1P63158 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Hmgb1P63158 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Hmgb1P63158 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Hmgb1P63158 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC8.18□□□□□ -1.1
Hmgb1P63158 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Hmgb1P63158 Gm37780-201ENSMUST00000194117 1873 ntBASIC8.17□□□□□ -1.1
Hmgb1P63158 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Hmgb1P63158 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Hmgb1P63158 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Hmgb1P63158 Gm43682-201ENSMUST00000202150 2090 ntBASIC8.17□□□□□ -1.1
Hmgb1P63158 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Hmgb1P63158 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Hmgb1P63158 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Hmgb1P63158 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC8.17□□□□□ -1.1
Hmgb1P63158 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Hmgb1P63158 Gm42969-201ENSMUST00000199858 3631 ntBASIC8.17□□□□□ -1.1
Hmgb1P63158 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Hmgb1P63158 Gm24462-201ENSMUST00000102430 106 ntBASIC8.17□□□□□ -1.1
Hmgb1P63158 Tmem91-202ENSMUST00000108404 485 ntTSL 5 BASIC8.17□□□□□ -1.1
Hmgb1P63158 Gm10241-201ENSMUST00000117664 286 ntBASIC8.17□□□□□ -1.1
Hmgb1P63158 Gm15576-201ENSMUST00000117806 583 ntBASIC8.17□□□□□ -1.1
Hmgb1P63158 Gm12365-201ENSMUST00000117931 568 ntBASIC8.17□□□□□ -1.1
Hmgb1P63158 Gm15913-201ENSMUST00000118492 331 ntBASIC8.17□□□□□ -1.1
Hmgb1P63158 Gm15186-201ENSMUST00000119345 563 ntBASIC8.17□□□□□ -1.1
Hmgb1P63158 Gm16016-201ENSMUST00000120831 550 ntBASIC8.17□□□□□ -1.1
Hmgb1P63158 Trav8-2-201ENSMUST00000130122 337 ntBASIC8.17□□□□□ -1.1
Hmgb1P63158 Gm24011-201ENSMUST00000157732 268 ntBASIC8.17□□□□□ -1.1
Hmgb1P63158 Gm24363-201ENSMUST00000158440 311 ntBASIC8.17□□□□□ -1.1
Hmgb1P63158 Gm8974-201ENSMUST00000175770 479 ntBASIC8.17□□□□□ -1.1
Hmgb1P63158 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC8.17□□□□□ -1.1
Hmgb1P63158 Gm9149-201ENSMUST00000182724 1007 ntBASIC8.17□□□□□ -1.1
Hmgb1P63158 Gm42431-201ENSMUST00000196880 323 ntBASIC8.17□□□□□ -1.1
Hmgb1P63158 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Hmgb1P63158 Gm5307-201ENSMUST00000204772 760 ntBASIC8.17□□□□□ -1.1
Hmgb1P63158 Gm4574-201ENSMUST00000207804 542 ntBASIC8.17□□□□□ -1.1
Hmgb1P63158 Mrpl22-201ENSMUST00000020820 722 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Hmgb1P63158 Gm45712-201ENSMUST00000212417 335 ntBASIC8.17□□□□□ -1.1
Hmgb1P63158 AC172027.1-201ENSMUST00000217659 337 ntBASIC8.17□□□□□ -1.1
Hmgb1P63158 Gm46379-201ENSMUST00000222551 265 ntBASIC8.17□□□□□ -1.1
Hmgb1P63158 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Hmgb1P63158 Olfr328-201ENSMUST00000073933 933 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Hmgb1P63158 Gm15732-201ENSMUST00000079794 480 ntBASIC8.17□□□□□ -1.1
Hmgb1P63158 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Hmgb1P63158 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Hmgb1P63158 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Hmgb1P63158 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Hmgb1P63158 Fv1-201ENSMUST00000094481 1380 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Hmgb1P63158 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC8.17□□□□□ -1.1
Hmgb1P63158 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC8.17□□□□□ -1.1
Hmgb1P63158 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Hmgb1P63158 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC8.17□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 135.5 ms