Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Olfr52-202ENSMUST00000215138 2751 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
HttP42859 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC7.18□□□□□ -1.26
HttP42859 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC7.18□□□□□ -1.26
HttP42859 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC7.18□□□□□ -1.26
HttP42859 Gm2325-201ENSMUST00000186637 581 ntBASIC7.18□□□□□ -1.26
HttP42859 Gm6137-201ENSMUST00000187552 578 ntBASIC7.18□□□□□ -1.26
HttP42859 Gm3148-201ENSMUST00000203594 612 ntBASIC7.18□□□□□ -1.26
HttP42859 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
HttP42859 AC132587.1-201ENSMUST00000220562 166 ntBASIC7.18□□□□□ -1.26
HttP42859 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC7.18□□□□□ -1.26
HttP42859 Gm7768-201ENSMUST00000222988 597 ntBASIC7.18□□□□□ -1.26
HttP42859 AC113198.1-201ENSMUST00000226353 832 ntBASIC7.18□□□□□ -1.26
HttP42859 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HttP42859 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
HttP42859 Gm4767-202ENSMUST00000188096 4725 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HttP42859 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HttP42859 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
HttP42859 Gm43537-201ENSMUST00000199064 3110 ntBASIC7.18□□□□□ -1.26
HttP42859 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HttP42859 Ppip5k1-204ENSMUST00000110627 5494 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
HttP42859 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC7.18□□□□□ -1.26
HttP42859 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HttP42859 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC7.18□□□□□ -1.26
HttP42859 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HttP42859 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HttP42859 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
HttP42859 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HttP42859 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
HttP42859 Gm15766-201ENSMUST00000118025 813 ntBASIC7.18□□□□□ -1.26
HttP42859 Gm12734-201ENSMUST00000120228 948 ntBASIC7.18□□□□□ -1.26
HttP42859 Gm25019-201ENSMUST00000179732 110 ntBASIC7.18□□□□□ -1.26
HttP42859 Mir6926-201ENSMUST00000184562 68 ntBASIC7.18□□□□□ -1.26
HttP42859 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC7.18□□□□□ -1.26
HttP42859 Gm17950-201ENSMUST00000214617 646 ntBASIC7.18□□□□□ -1.26
HttP42859 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
HttP42859 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
HttP42859 Nfia-203ENSMUST00000092532 9382 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HttP42859 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
HttP42859 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
HttP42859 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HttP42859 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC7.17□□□□□ -1.26
HttP42859 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
HttP42859 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HttP42859 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HttP42859 Gm6181-201ENSMUST00000117187 264 ntBASIC7.17□□□□□ -1.26
HttP42859 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC7.17□□□□□ -1.26
HttP42859 Gm8009-201ENSMUST00000191672 436 ntBASIC7.17□□□□□ -1.26
HttP42859 AC133650.1-201ENSMUST00000217243 578 ntBASIC7.17□□□□□ -1.26
HttP42859 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC7.17□□□□□ -1.26
HttP42859 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
HttP42859 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HttP42859 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
HttP42859 Pde7b-201ENSMUST00000020165 4137 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
HttP42859 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HttP42859 Gm44950-201ENSMUST00000206403 2296 ntBASIC7.17□□□□□ -1.26
HttP42859 Trpm8-201ENSMUST00000040210 4146 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
HttP42859 Ccser1-201ENSMUST00000045522 2688 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HttP42859 Vmn2r8-201ENSMUST00000172140 2547 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
HttP42859 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HttP42859 Ces1c-201ENSMUST00000034189 1828 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HttP42859 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC7.17□□□□□ -1.26
HttP42859 Mir3095-201ENSMUST00000175552 87 ntBASIC7.17□□□□□ -1.26
HttP42859 Gm44361-201ENSMUST00000197960 94 ntBASIC7.17□□□□□ -1.26
HttP42859 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC7.17□□□□□ -1.26
HttP42859 AL713985.1-201ENSMUST00000219030 420 ntBASIC7.17□□□□□ -1.26
HttP42859 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
HttP42859 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HttP42859 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
HttP42859 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HttP42859 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
HttP42859 Rims2-205ENSMUST00000227243 4760 ntAPPRIS ALT2 BASIC7.17□□□□□ -1.26
HttP42859 Gm45537-201ENSMUST00000211539 2708 ntBASIC7.17□□□□□ -1.26
HttP42859 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HttP42859 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HttP42859 Gm37984-201ENSMUST00000191641 3733 ntBASIC7.17□□□□□ -1.26
HttP42859 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HttP42859 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HttP42859 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HttP42859 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
HttP42859 Pik3cg-207ENSMUST00000220366 4660 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HttP42859 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HttP42859 Fto-204ENSMUST00000136802 3751 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HttP42859 AC163660.4-201ENSMUST00000224983 2171 ntBASIC7.17□□□□□ -1.26
HttP42859 Edar-201ENSMUST00000003312 3637 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HttP42859 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
HttP42859 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC7.16□□□□□ -1.26
HttP42859 Gm12287-201ENSMUST00000119770 707 ntBASIC7.16□□□□□ -1.26
HttP42859 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC7.16□□□□□ -1.26
HttP42859 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HttP42859 Gm44265-201ENSMUST00000203631 465 ntBASIC7.16□□□□□ -1.26
HttP42859 AC164567.4-201ENSMUST00000219708 483 ntBASIC7.16□□□□□ -1.26
HttP42859 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HttP42859 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC7.16□□□□□ -1.26
HttP42859 Gm45174-201ENSMUST00000208884 3065 ntBASIC7.16□□□□□ -1.26
HttP42859 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HttP42859 Farsb-201ENSMUST00000068333 1951 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HttP42859 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
HttP42859 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HttP42859 Grm8-203ENSMUST00000115324 3299 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
HttP42859 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms