Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Cxcl12P40224 Olfr1261-203ENSMUST00000213909 2912 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
Cxcl12P40224 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Cxcl12P40224 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Cxcl12P40224 Cbx3-204ENSMUST00000114446 1719 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Cxcl12P40224 Rps6ka6-201ENSMUST00000065976 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Cxcl12P40224 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Cxcl12P40224 Mir697-201ENSMUST00000102316 109 ntBASIC7.36□□□□□ -1.23
Cxcl12P40224 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Cxcl12P40224 Gm5319-201ENSMUST00000118965 873 ntBASIC7.36□□□□□ -1.23
Cxcl12P40224 Gm13430-201ENSMUST00000121366 288 ntBASIC7.36□□□□□ -1.23
Cxcl12P40224 Gm2986-201ENSMUST00000121603 382 ntBASIC7.36□□□□□ -1.23
Cxcl12P40224 Gm23225-201ENSMUST00000158121 114 ntBASIC7.36□□□□□ -1.23
Cxcl12P40224 Gm24228-201ENSMUST00000158829 129 ntBASIC7.36□□□□□ -1.23
Cxcl12P40224 Gm6428-201ENSMUST00000161062 345 ntBASIC7.36□□□□□ -1.23
Cxcl12P40224 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC7.36□□□□□ -1.23
Cxcl12P40224 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC7.36□□□□□ -1.23
Cxcl12P40224 Mir7653-201ENSMUST00000184358 61 ntBASIC7.36□□□□□ -1.23
Cxcl12P40224 Gm28846-201ENSMUST00000189161 368 ntBASIC7.36□□□□□ -1.23
Cxcl12P40224 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC7.36□□□□□ -1.23
Cxcl12P40224 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC7.36□□□□□ -1.23
Cxcl12P40224 AC104906.1-201ENSMUST00000218122 913 ntBASIC7.36□□□□□ -1.23
Cxcl12P40224 AC126554.3-201ENSMUST00000223131 493 ntBASIC7.36□□□□□ -1.23
Cxcl12P40224 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC7.36□□□□□ -1.23
Cxcl12P40224 AC138329.1-201ENSMUST00000225040 471 ntBASIC7.36□□□□□ -1.23
Cxcl12P40224 AC154324.1-201ENSMUST00000226711 814 ntBASIC7.36□□□□□ -1.23
Cxcl12P40224 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Cxcl12P40224 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Cxcl12P40224 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Cxcl12P40224 Gm36938-201ENSMUST00000191612 2696 ntBASIC7.36□□□□□ -1.23
Cxcl12P40224 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Cxcl12P40224 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Cxcl12P40224 Cep72-201ENSMUST00000036456 3641 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Cxcl12P40224 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Cxcl12P40224 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Cxcl12P40224 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Cxcl12P40224 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Cxcl12P40224 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Cxcl12P40224 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Cxcl12P40224 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Cxcl12P40224 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Cxcl12P40224 Prepl-201ENSMUST00000072406 3294 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Cxcl12P40224 Gm43071-201ENSMUST00000197233 2032 ntBASIC7.35□□□□□ -1.23
Cxcl12P40224 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
Cxcl12P40224 Cdc6-202ENSMUST00000093937 2559 ntAPPRIS P4 TSL 1 (best) BASIC7.35□□□□□ -1.23
Cxcl12P40224 Calcr-202ENSMUST00000115622 3721 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Cxcl12P40224 Casp14-202ENSMUST00000219237 2200 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Cxcl12P40224 Gm8177-201ENSMUST00000181591 1336 ntBASIC7.35□□□□□ -1.23
Cxcl12P40224 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Cxcl12P40224 Runx1t1-202ENSMUST00000098256 3317 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
Cxcl12P40224 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
Cxcl12P40224 Gm37465-201ENSMUST00000192845 3290 ntBASIC7.35□□□□□ -1.23
Cxcl12P40224 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
Cxcl12P40224 Gm13878-201ENSMUST00000117986 577 ntBASIC7.35□□□□□ -1.23
Cxcl12P40224 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC7.35□□□□□ -1.23
Cxcl12P40224 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC7.35□□□□□ -1.23
Cxcl12P40224 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC7.35□□□□□ -1.23
Cxcl12P40224 Gm25387-201ENSMUST00000157813 132 ntBASIC7.35□□□□□ -1.23
Cxcl12P40224 Gm3076-201ENSMUST00000161613 451 ntBASIC7.35□□□□□ -1.23
Cxcl12P40224 Gm7426-201ENSMUST00000179046 404 ntBASIC7.35□□□□□ -1.23
Cxcl12P40224 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Cxcl12P40224 Gm27030-201ENSMUST00000182551 464 ntBASIC7.35□□□□□ -1.23
Cxcl12P40224 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC7.35□□□□□ -1.23
Cxcl12P40224 Gm38022-201ENSMUST00000191762 403 ntBASIC7.35□□□□□ -1.23
Cxcl12P40224 Gm6077-201ENSMUST00000196008 499 ntBASIC7.35□□□□□ -1.23
Cxcl12P40224 Gm7285-201ENSMUST00000198801 580 ntBASIC7.35□□□□□ -1.23
Cxcl12P40224 Gm43141-201ENSMUST00000199695 274 ntBASIC7.35□□□□□ -1.23
Cxcl12P40224 Gm18690-201ENSMUST00000204488 985 ntBASIC7.35□□□□□ -1.23
Cxcl12P40224 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC7.35□□□□□ -1.23
Cxcl12P40224 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC7.35□□□□□ -1.23
Cxcl12P40224 Gm36758-201ENSMUST00000222594 310 ntBASIC7.35□□□□□ -1.23
Cxcl12P40224 AC154757.2-201ENSMUST00000228885 743 ntBASIC7.35□□□□□ -1.23
Cxcl12P40224 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Cxcl12P40224 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC7.35□□□□□ -1.23
Cxcl12P40224 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Cxcl12P40224 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Cxcl12P40224 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Cxcl12P40224 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Cxcl12P40224 Btbd10-202ENSMUST00000117577 2384 ntAPPRIS ALT1 TSL 5 BASIC7.35□□□□□ -1.23
Cxcl12P40224 Pes1-202ENSMUST00000109985 2923 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Cxcl12P40224 Pes1-201ENSMUST00000020705 2911 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Cxcl12P40224 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Cxcl12P40224 Olfr1350-202ENSMUST00000207221 1521 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
Cxcl12P40224 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Cxcl12P40224 Sox6-212ENSMUST00000206369 2863 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Cxcl12P40224 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Cxcl12P40224 AC093043.2-201ENSMUST00000228616 2017 ntBASIC7.35□□□□□ -1.23
Cxcl12P40224 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Cxcl12P40224 Nedd4-209ENSMUST00000184450 3329 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Cxcl12P40224 Unc5c-204ENSMUST00000130636 3595 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Cxcl12P40224 Aloxe3-201ENSMUST00000021268 3019 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Cxcl12P40224 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Cxcl12P40224 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Cxcl12P40224 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Cxcl12P40224 Scn8a-204ENSMUST00000108909 11436 ntTSL 5 BASIC7.35□□□□□ -1.23
Cxcl12P40224 Kantr-207ENSMUST00000195280 4212 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
Cxcl12P40224 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Cxcl12P40224 Gm3822-201ENSMUST00000201941 2935 ntBASIC7.34□□□□□ -1.23
Cxcl12P40224 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Cxcl12P40224 Olfr1212-202ENSMUST00000215781 3636 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms