Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Cul2-201ENSMUST00000025073 3727 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Col18a1P39061 Gm42576-201ENSMUST00000202336 2846 ntBASIC9.27□□□□□ -0.93
Col18a1P39061 Pdgfrb-202ENSMUST00000115274 5423 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Col18a1P39061 Mycbpap-202ENSMUST00000093945 3168 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Col18a1P39061 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Col18a1P39061 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Col18a1P39061 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC9.27□□□□□ -0.93
Col18a1P39061 Gm22523-201ENSMUST00000158696 100 ntBASIC9.27□□□□□ -0.93
Col18a1P39061 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC9.27□□□□□ -0.93
Col18a1P39061 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Col18a1P39061 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC9.27□□□□□ -0.93
Col18a1P39061 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Col18a1P39061 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Col18a1P39061 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Col18a1P39061 Gm2539-203ENSMUST00000181352 746 ntBASIC9.27□□□□□ -0.93
Col18a1P39061 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC9.27□□□□□ -0.93
Col18a1P39061 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC9.27□□□□□ -0.93
Col18a1P39061 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Col18a1P39061 Gm44471-201ENSMUST00000197963 100 ntBASIC9.27□□□□□ -0.93
Col18a1P39061 CT025526.1-201ENSMUST00000217327 267 ntBASIC9.27□□□□□ -0.93
Col18a1P39061 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Col18a1P39061 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Col18a1P39061 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Col18a1P39061 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Col18a1P39061 Gm25587-201ENSMUST00000082498 166 ntBASIC9.27□□□□□ -0.93
Col18a1P39061 Tcf4-201ENSMUST00000066717 4250 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Col18a1P39061 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC9.27□□□□□ -0.93
Col18a1P39061 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Col18a1P39061 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Col18a1P39061 Gm28581-201ENSMUST00000186086 2177 ntBASIC9.26□□□□□ -0.93
Col18a1P39061 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Col18a1P39061 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Col18a1P39061 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Col18a1P39061 Pcdh15-241ENSMUST00000195531 5241 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Col18a1P39061 Kdm5a-201ENSMUST00000005108 10944 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Col18a1P39061 Lamb3-202ENSMUST00000159955 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Col18a1P39061 Nbr1-202ENSMUST00000103098 4654 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Col18a1P39061 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Col18a1P39061 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC9.26□□□□□ -0.93
Col18a1P39061 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Col18a1P39061 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC9.26□□□□□ -0.93
Col18a1P39061 Myadm-204ENSMUST00000203566 4028 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Col18a1P39061 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Col18a1P39061 Gm26903-201ENSMUST00000180749 4583 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Col18a1P39061 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Col18a1P39061 Gsdmc4-202ENSMUST00000188108 2085 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Col18a1P39061 n-R5s72-201ENSMUST00000104518 119 ntBASIC9.26□□□□□ -0.93
Col18a1P39061 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC9.26□□□□□ -0.93
Col18a1P39061 Gm25459-201ENSMUST00000157953 114 ntBASIC9.26□□□□□ -0.93
Col18a1P39061 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC9.26□□□□□ -0.93
Col18a1P39061 Gm21392-201ENSMUST00000182950 972 ntBASIC9.26□□□□□ -0.93
Col18a1P39061 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC9.26□□□□□ -0.93
Col18a1P39061 Gm28923-201ENSMUST00000187755 322 ntBASIC9.26□□□□□ -0.93
Col18a1P39061 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC9.26□□□□□ -0.93
Col18a1P39061 Gm43354-201ENSMUST00000196862 346 ntBASIC9.26□□□□□ -0.93
Col18a1P39061 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC9.26□□□□□ -0.93
Col18a1P39061 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
Col18a1P39061 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC9.26□□□□□ -0.93
Col18a1P39061 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Col18a1P39061 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Col18a1P39061 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Col18a1P39061 Chid1-209ENSMUST00000166082 4222 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Col18a1P39061 Ano7-202ENSMUST00000186641 3984 ntAPPRIS P3 TSL 5 BASIC9.26□□□□□ -0.93
Col18a1P39061 Ptpro-202ENSMUST00000167002 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Col18a1P39061 Prdm15-201ENSMUST00000095849 6346 ntAPPRIS P2 TSL 5 BASIC9.26□□□□□ -0.93
Col18a1P39061 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Col18a1P39061 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Col18a1P39061 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col18a1P39061 Grb10-203ENSMUST00000109654 4755 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col18a1P39061 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col18a1P39061 Sdr42e1-201ENSMUST00000037955 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col18a1P39061 Tktl2-202ENSMUST00000183187 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col18a1P39061 Slc39a9-201ENSMUST00000085245 5201 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col18a1P39061 Gm7134-201ENSMUST00000122296 2406 ntBASIC9.25□□□□□ -0.93
Col18a1P39061 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Col18a1P39061 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC9.25□□□□□ -0.93
Col18a1P39061 Gm12447-201ENSMUST00000119110 470 ntBASIC9.25□□□□□ -0.93
Col18a1P39061 Gm7700-201ENSMUST00000120273 970 ntBASIC9.25□□□□□ -0.93
Col18a1P39061 Mir1932-201ENSMUST00000157390 90 ntBASIC9.25□□□□□ -0.93
Col18a1P39061 Gm22599-201ENSMUST00000157597 132 ntBASIC9.25□□□□□ -0.93
Col18a1P39061 Gm25717-201ENSMUST00000158631 353 ntBASIC9.25□□□□□ -0.93
Col18a1P39061 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col18a1P39061 AC153932.1-201ENSMUST00000218558 787 ntBASIC9.25□□□□□ -0.93
Col18a1P39061 Gm18409-202ENSMUST00000220105 529 ntBASIC9.25□□□□□ -0.93
Col18a1P39061 AC139568.1-201ENSMUST00000222878 486 ntBASIC9.25□□□□□ -0.93
Col18a1P39061 AC156016.2-201ENSMUST00000228200 525 ntBASIC9.25□□□□□ -0.93
Col18a1P39061 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC9.25□□□□□ -0.93
Col18a1P39061 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Col18a1P39061 Gm44007-201ENSMUST00000203845 2189 ntBASIC9.25□□□□□ -0.93
Col18a1P39061 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Col18a1P39061 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col18a1P39061 Pot1b-201ENSMUST00000086876 3499 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Col18a1P39061 Kif13b-203ENSMUST00000224503 8865 ntAPPRIS ALT2 BASIC9.25□□□□□ -0.93
Col18a1P39061 Wwtr1-202ENSMUST00000120977 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col18a1P39061 2010111I01Rik-202ENSMUST00000091560 3509 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col18a1P39061 Myo18a-209ENSMUST00000108376 7374 ntTSL 5 BASIC9.25□□□□□ -0.93
Col18a1P39061 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Col18a1P39061 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Col18a1P39061 Chrna2-201ENSMUST00000022620 3554 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col18a1P39061 Gm7967-202ENSMUST00000191042 5042 ntBASIC9.25□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms