Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm11796-201ENSMUST00000120208 972 ntBASIC7.98□□□□□ -1.13
Col2a1P28481 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC7.98□□□□□ -1.13
Col2a1P28481 Gm13462-201ENSMUST00000121472 961 ntBASIC7.98□□□□□ -1.13
Col2a1P28481 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Col2a1P28481 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC7.98□□□□□ -1.13
Col2a1P28481 Gm5871-201ENSMUST00000176461 718 ntBASIC7.98□□□□□ -1.13
Col2a1P28481 Gm21392-201ENSMUST00000182950 972 ntBASIC7.98□□□□□ -1.13
Col2a1P28481 Gm5345-201ENSMUST00000183076 1014 ntBASIC7.98□□□□□ -1.13
Col2a1P28481 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC7.98□□□□□ -1.13
Col2a1P28481 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC7.98□□□□□ -1.13
Col2a1P28481 AC122844.1-201ENSMUST00000195971 107 ntBASIC7.98□□□□□ -1.13
Col2a1P28481 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC7.98□□□□□ -1.13
Col2a1P28481 Gm42443-201ENSMUST00000198084 1155 ntBASIC7.98□□□□□ -1.13
Col2a1P28481 Gm43089-201ENSMUST00000199162 275 ntBASIC7.98□□□□□ -1.13
Col2a1P28481 Gm19175-201ENSMUST00000199895 916 ntBASIC7.98□□□□□ -1.13
Col2a1P28481 Gm43235-201ENSMUST00000200121 297 ntBASIC7.98□□□□□ -1.13
Col2a1P28481 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC7.98□□□□□ -1.13
Col2a1P28481 Gm9367-201ENSMUST00000205703 546 ntBASIC7.98□□□□□ -1.13
Col2a1P28481 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC7.98□□□□□ -1.13
Col2a1P28481 Gm17950-201ENSMUST00000214617 646 ntBASIC7.98□□□□□ -1.13
Col2a1P28481 Gm5119-201ENSMUST00000215858 634 ntBASIC7.98□□□□□ -1.13
Col2a1P28481 AC138329.1-201ENSMUST00000225040 471 ntBASIC7.98□□□□□ -1.13
Col2a1P28481 AC163667.1-201ENSMUST00000225201 1289 ntBASIC7.98□□□□□ -1.13
Col2a1P28481 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Col2a1P28481 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Col2a1P28481 Gm11733-201ENSMUST00000092394 2311 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
Col2a1P28481 Kcnd2-201ENSMUST00000081542 5152 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Col2a1P28481 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Col2a1P28481 Vmn1r26-203ENSMUST00000228070 4419 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Col2a1P28481 Gm12919-201ENSMUST00000119855 1594 ntBASIC7.98□□□□□ -1.13
Col2a1P28481 Abca1-201ENSMUST00000030010 10262 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Col2a1P28481 Zfp882-201ENSMUST00000110002 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Col2a1P28481 Gm37783-201ENSMUST00000192025 1856 ntBASIC7.98□□□□□ -1.13
Col2a1P28481 Angpt2-201ENSMUST00000033846 3560 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Col2a1P28481 Zfp180-201ENSMUST00000068975 3901 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col2a1P28481 Gm12021-201ENSMUST00000121061 1746 ntBASIC7.97□□□□□ -1.13
Col2a1P28481 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col2a1P28481 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC7.97□□□□□ -1.13
Col2a1P28481 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col2a1P28481 Gm5361-201ENSMUST00000211041 1498 ntBASIC7.97□□□□□ -1.13
Col2a1P28481 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC7.97□□□□□ -1.13
Col2a1P28481 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC7.97□□□□□ -1.13
Col2a1P28481 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Col2a1P28481 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC7.97□□□□□ -1.13
Col2a1P28481 Gm5512-202ENSMUST00000220222 1522 ntBASIC7.97□□□□□ -1.13
Col2a1P28481 Zhx3-201ENSMUST00000103111 9563 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col2a1P28481 Cep57l1-209ENSMUST00000189770 2232 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col2a1P28481 Gm26144-201ENSMUST00000104475 132 ntBASIC7.97□□□□□ -1.13
Col2a1P28481 Gm6654-201ENSMUST00000118950 348 ntBASIC7.97□□□□□ -1.13
Col2a1P28481 Gm11445-201ENSMUST00000119101 532 ntBASIC7.97□□□□□ -1.13
Col2a1P28481 Gm15596-201ENSMUST00000121139 784 ntBASIC7.97□□□□□ -1.13
Col2a1P28481 Gm11472-201ENSMUST00000121305 556 ntBASIC7.97□□□□□ -1.13
Col2a1P28481 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC7.97□□□□□ -1.13
Col2a1P28481 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Col2a1P28481 Gm3140-201ENSMUST00000163523 481 ntBASIC7.97□□□□□ -1.13
Col2a1P28481 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Col2a1P28481 Gm20432-201ENSMUST00000173716 250 ntBASIC7.97□□□□□ -1.13
Col2a1P28481 Gm35323-201ENSMUST00000191836 499 ntBASIC7.97□□□□□ -1.13
Col2a1P28481 Gm10416-201ENSMUST00000197379 645 ntBASIC7.97□□□□□ -1.13
Col2a1P28481 AC117240.1-201ENSMUST00000199436 61 ntBASIC7.97□□□□□ -1.13
Col2a1P28481 Gm43772-201ENSMUST00000202052 379 ntBASIC7.97□□□□□ -1.13
Col2a1P28481 Gm44705-201ENSMUST00000206719 339 ntBASIC7.97□□□□□ -1.13
Col2a1P28481 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC7.97□□□□□ -1.13
Col2a1P28481 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC7.97□□□□□ -1.13
Col2a1P28481 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Col2a1P28481 Gm18914-201ENSMUST00000214625 616 ntBASIC7.97□□□□□ -1.13
Col2a1P28481 Gm17849-201ENSMUST00000219788 853 ntBASIC7.97□□□□□ -1.13
Col2a1P28481 CT009711.2-201ENSMUST00000225352 934 ntBASIC7.97□□□□□ -1.13
Col2a1P28481 AC116596.2-203ENSMUST00000227345 731 ntBASIC7.97□□□□□ -1.13
Col2a1P28481 AC158954.1-201ENSMUST00000228272 1006 ntBASIC7.97□□□□□ -1.13
Col2a1P28481 AC132833.4-201ENSMUST00000228313 203 ntBASIC7.97□□□□□ -1.13
Col2a1P28481 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Col2a1P28481 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Col2a1P28481 AC122828.2-201ENSMUST00000222511 2880 ntBASIC7.97□□□□□ -1.13
Col2a1P28481 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Col2a1P28481 Pcyt1a-203ENSMUST00000115137 4244 ntTSL 5 BASIC7.97□□□□□ -1.13
Col2a1P28481 Chn2-202ENSMUST00000067741 2983 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Col2a1P28481 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC7.97□□□□□ -1.13
Col2a1P28481 Rnf43-209ENSMUST00000165679 4310 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Col2a1P28481 Pramel-201ENSMUST00000118979 1383 ntBASIC7.97□□□□□ -1.13
Col2a1P28481 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC7.97□□□□□ -1.13
Col2a1P28481 Gm7961-201ENSMUST00000201338 1436 ntBASIC7.97□□□□□ -1.13
Col2a1P28481 Helz2-203ENSMUST00000121484 10063 ntTSL 5 BASIC7.97□□□□□ -1.13
Col2a1P28481 C87436-203ENSMUST00000113700 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col2a1P28481 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col2a1P28481 Plch1-201ENSMUST00000048134 6259 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col2a1P28481 Olfr943-204ENSMUST00000213830 8305 ntAPPRIS ALT2 TSL 3 BASIC7.96□□□□□ -1.13
Col2a1P28481 Plxna4-201ENSMUST00000115096 12877 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Col2a1P28481 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Col2a1P28481 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Col2a1P28481 Ccdc187-202ENSMUST00000217256 9411 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.13
Col2a1P28481 Gm44121-201ENSMUST00000205169 2006 ntBASIC7.96□□□□□ -1.13
Col2a1P28481 Gm43128-201ENSMUST00000202212 1621 ntBASIC7.96□□□□□ -1.13
Col2a1P28481 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Col2a1P28481 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
Col2a1P28481 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Col2a1P28481 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC7.96□□□□□ -1.13
Col2a1P28481 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Col2a1P28481 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Col2a1P28481 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms