Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Nol4-202ENSMUST00000081423 3309 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Hoxd8P23463 Gm37549-201ENSMUST00000194096 4065 ntBASIC8.33□□□□□ -1.08
Hoxd8P23463 Nod2-202ENSMUST00000109634 4666 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Hoxd8P23463 Igkv3-4-201ENSMUST00000103401 360 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Hoxd8P23463 Gm12851-201ENSMUST00000117920 421 ntBASIC8.33□□□□□ -1.08
Hoxd8P23463 Kxd1-203ENSMUST00000118850 992 ntTSL 2 BASIC8.33□□□□□ -1.08
Hoxd8P23463 Gm15153-201ENSMUST00000119867 274 ntBASIC8.33□□□□□ -1.08
Hoxd8P23463 Defa-ps13-201ENSMUST00000120695 204 ntBASIC8.33□□□□□ -1.08
Hoxd8P23463 Mir1898-201ENSMUST00000122643 83 ntBASIC8.33□□□□□ -1.08
Hoxd8P23463 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Hoxd8P23463 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Hoxd8P23463 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Hoxd8P23463 Tsc22d1-205ENSMUST00000133224 786 ntTSL 2 BASIC8.33□□□□□ -1.08
Hoxd8P23463 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Hoxd8P23463 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
Hoxd8P23463 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC8.33□□□□□ -1.08
Hoxd8P23463 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC8.33□□□□□ -1.08
Hoxd8P23463 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC8.33□□□□□ -1.08
Hoxd8P23463 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Hoxd8P23463 Gm5698-201ENSMUST00000178317 724 ntBASIC8.33□□□□□ -1.08
Hoxd8P23463 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Hoxd8P23463 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Hoxd8P23463 Gm4308-201ENSMUST00000179735 914 ntBASIC8.33□□□□□ -1.08
Hoxd8P23463 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC8.33□□□□□ -1.08
Hoxd8P23463 Gm27659-201ENSMUST00000183472 98 ntBASIC8.33□□□□□ -1.08
Hoxd8P23463 Gm27315-201ENSMUST00000183977 154 ntBASIC8.33□□□□□ -1.08
Hoxd8P23463 Gm27236-201ENSMUST00000184147 442 ntBASIC8.33□□□□□ -1.08
Hoxd8P23463 Serpina3a-203ENSMUST00000185595 1720 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Hoxd8P23463 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Hoxd8P23463 Gm29357-201ENSMUST00000186877 698 ntBASIC8.33□□□□□ -1.08
Hoxd8P23463 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC8.33□□□□□ -1.08
Hoxd8P23463 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Hoxd8P23463 Gm28803-201ENSMUST00000190385 764 ntBASIC8.33□□□□□ -1.08
Hoxd8P23463 Gbp6-201ENSMUST00000196520 2604 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Hoxd8P23463 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC8.33□□□□□ -1.08
Hoxd8P23463 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC8.33□□□□□ -1.08
Hoxd8P23463 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Hoxd8P23463 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC8.33□□□□□ -1.08
Hoxd8P23463 AC116589.3-202ENSMUST00000221770 649 ntBASIC8.33□□□□□ -1.08
Hoxd8P23463 AC116589.6-201ENSMUST00000222252 649 ntBASIC8.33□□□□□ -1.08
Hoxd8P23463 AC121114.1-201ENSMUST00000228522 570 ntBASIC8.33□□□□□ -1.08
Hoxd8P23463 Kif1b-201ENSMUST00000030806 6991 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Hoxd8P23463 Mgat4d-201ENSMUST00000038692 1293 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Hoxd8P23463 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Hoxd8P23463 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Hoxd8P23463 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Hoxd8P23463 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Hoxd8P23463 Tvp23a-201ENSMUST00000051118 3315 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Hoxd8P23463 Asb17-201ENSMUST00000044089 2553 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Hoxd8P23463 Blm-202ENSMUST00000170315 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Hoxd8P23463 Vps39-201ENSMUST00000028752 4339 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Hoxd8P23463 Zfp939-201ENSMUST00000061201 2131 ntBASIC8.33□□□□□ -1.08
Hoxd8P23463 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Hoxd8P23463 AC112265.1-201ENSMUST00000213522 1501 ntTSL 5 BASIC8.33□□□□□ -1.08
Hoxd8P23463 Kansl3-204ENSMUST00000185912 4527 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Hoxd8P23463 Emc1-205ENSMUST00000179784 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Hoxd8P23463 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Hoxd8P23463 D7Ertd443e-201ENSMUST00000094002 2908 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Hoxd8P23463 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Hoxd8P23463 Slc6a3-201ENSMUST00000022100 3456 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Hoxd8P23463 Egf-202ENSMUST00000197079 3346 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Hoxd8P23463 Lrrc66-201ENSMUST00000087177 3198 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Hoxd8P23463 D630045J12Rik-206ENSMUST00000169256 10968 ntAPPRIS P2 TSL 5 BASIC8.32□□□□□ -1.08
Hoxd8P23463 Gm6327-201ENSMUST00000171185 1335 ntBASIC8.32□□□□□ -1.08
Hoxd8P23463 Msh4-205ENSMUST00000190449 3110 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Hoxd8P23463 Adgrf4-203ENSMUST00000167993 2983 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Hoxd8P23463 Aqp9-203ENSMUST00000113570 1712 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Hoxd8P23463 Smc2-201ENSMUST00000102915 5404 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Hoxd8P23463 Cenpi-201ENSMUST00000081064 3227 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Hoxd8P23463 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Hoxd8P23463 Thrb-202ENSMUST00000022304 6200 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Hoxd8P23463 Rgs9-203ENSMUST00000106704 3464 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Hoxd8P23463 Brip1os-201ENSMUST00000128960 4423 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Hoxd8P23463 Polr3f-201ENSMUST00000028914 4403 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Hoxd8P23463 Gm37978-201ENSMUST00000194736 2915 ntBASIC8.32□□□□□ -1.08
Hoxd8P23463 Rpgr-203ENSMUST00000073392 2926 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Hoxd8P23463 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Hoxd8P23463 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Hoxd8P23463 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Hoxd8P23463 Gm17076-201ENSMUST00000165185 1401 ntBASIC8.32□□□□□ -1.08
Hoxd8P23463 Zfp819-201ENSMUST00000032661 2362 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Hoxd8P23463 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Hoxd8P23463 Heatr5b-201ENSMUST00000097281 6437 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Hoxd8P23463 Bicc1-202ENSMUST00000131445 3005 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Hoxd8P23463 Olfr1019-201ENSMUST00000102634 933 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Hoxd8P23463 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Hoxd8P23463 Gm16383-201ENSMUST00000118122 232 ntBASIC8.32□□□□□ -1.08
Hoxd8P23463 Gm15709-201ENSMUST00000118354 213 ntBASIC8.32□□□□□ -1.08
Hoxd8P23463 Gm14985-201ENSMUST00000118693 786 ntBASIC8.32□□□□□ -1.08
Hoxd8P23463 Gm13163-201ENSMUST00000119875 336 ntBASIC8.32□□□□□ -1.08
Hoxd8P23463 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC8.32□□□□□ -1.08
Hoxd8P23463 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Hoxd8P23463 Gm23762-201ENSMUST00000158348 106 ntBASIC8.32□□□□□ -1.08
Hoxd8P23463 Gm9141-201ENSMUST00000159355 1007 ntBASIC8.32□□□□□ -1.08
Hoxd8P23463 Gm6264-201ENSMUST00000160802 624 ntBASIC8.32□□□□□ -1.08
Hoxd8P23463 Gm17205-201ENSMUST00000168370 1207 ntBASIC8.32□□□□□ -1.08
Hoxd8P23463 Gm21293-201ENSMUST00000170919 864 ntTSL 5 BASIC8.32□□□□□ -1.08
Hoxd8P23463 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Hoxd8P23463 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Hoxd8P23463 Mir6989-201ENSMUST00000184812 65 ntBASIC8.32□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms