Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm6465-201ENSMUST00000168154 1098 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Sdc1P18828 Lgals1-ps2-201ENSMUST00000170221 519 ntBASIC5.64□□□□□ -1.51
Sdc1P18828 Gm23617-201ENSMUST00000175410 95 ntBASIC5.64□□□□□ -1.51
Sdc1P18828 Gm5272-201ENSMUST00000182730 982 ntBASIC5.64□□□□□ -1.51
Sdc1P18828 Gm27197-201ENSMUST00000184325 479 ntTSL 3 BASIC5.64□□□□□ -1.51
Sdc1P18828 Gm8307-201ENSMUST00000187682 1150 ntBASIC5.64□□□□□ -1.51
Sdc1P18828 Gm17847-201ENSMUST00000188261 1127 ntBASIC5.64□□□□□ -1.51
Sdc1P18828 Gm28416-201ENSMUST00000188334 292 ntBASIC5.64□□□□□ -1.51
Sdc1P18828 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sdc1P18828 Gm3116-201ENSMUST00000189440 1116 ntBASIC5.64□□□□□ -1.51
Sdc1P18828 Gm29462-201ENSMUST00000191458 288 ntBASIC5.64□□□□□ -1.51
Sdc1P18828 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Sdc1P18828 Gm43247-201ENSMUST00000198638 481 ntBASIC5.64□□□□□ -1.51
Sdc1P18828 Gm43542-201ENSMUST00000199505 379 ntBASIC5.64□□□□□ -1.51
Sdc1P18828 Gm4977-201ENSMUST00000215709 1262 ntBASIC5.64□□□□□ -1.51
Sdc1P18828 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC5.64□□□□□ -1.51
Sdc1P18828 Gm19116-201ENSMUST00000218592 642 ntBASIC5.64□□□□□ -1.51
Sdc1P18828 AC166256.1-201ENSMUST00000219081 1271 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sdc1P18828 AC111092.1-201ENSMUST00000220181 411 ntTSL 3 BASIC5.64□□□□□ -1.51
Sdc1P18828 A930040O22Rik-201ENSMUST00000221662 973 ntBASIC5.64□□□□□ -1.51
Sdc1P18828 AC154324.1-201ENSMUST00000226711 814 ntBASIC5.64□□□□□ -1.51
Sdc1P18828 1700069L16Rik-201ENSMUST00000047891 537 ntAPPRIS P5 TSL 2 BASIC5.64□□□□□ -1.51
Sdc1P18828 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Sdc1P18828 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sdc1P18828 Gm10697-201ENSMUST00000091692 1023 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Sdc1P18828 Gm7731-201ENSMUST00000091759 470 ntBASIC5.64□□□□□ -1.51
Sdc1P18828 Tdpoz5-201ENSMUST00000098879 1023 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Sdc1P18828 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sdc1P18828 A230001M10Rik-202ENSMUST00000196720 1307 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sdc1P18828 AC107452.3-201ENSMUST00000228807 1308 ntBASIC5.64□□□□□ -1.51
Sdc1P18828 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sdc1P18828 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sdc1P18828 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sdc1P18828 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC5.64□□□□□ -1.51
Sdc1P18828 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sdc1P18828 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sdc1P18828 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sdc1P18828 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sdc1P18828 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Sdc1P18828 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sdc1P18828 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Sdc1P18828 AC113031.7-201ENSMUST00000228609 1928 ntBASIC5.64□□□□□ -1.51
Sdc1P18828 Gm14367-201ENSMUST00000119214 1497 ntBASIC5.64□□□□□ -1.51
Sdc1P18828 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Sdc1P18828 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Sdc1P18828 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Sdc1P18828 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Sdc1P18828 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Sdc1P18828 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Sdc1P18828 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Sdc1P18828 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Sdc1P18828 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Sdc1P18828 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sdc1P18828 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sdc1P18828 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sdc1P18828 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sdc1P18828 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sdc1P18828 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Sdc1P18828 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sdc1P18828 Gm33035-201ENSMUST00000219854 1718 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sdc1P18828 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sdc1P18828 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sdc1P18828 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sdc1P18828 AC167013.5-201ENSMUST00000227597 2947 ntBASIC5.63□□□□□ -1.51
Sdc1P18828 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sdc1P18828 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Sdc1P18828 Gm22671-201ENSMUST00000104420 134 ntBASIC5.63□□□□□ -1.51
Sdc1P18828 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
Sdc1P18828 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sdc1P18828 Gm14755-201ENSMUST00000118037 384 ntBASIC5.63□□□□□ -1.51
Sdc1P18828 Rpl9-ps2-201ENSMUST00000120821 577 ntBASIC5.63□□□□□ -1.51
Sdc1P18828 Gm12632-201ENSMUST00000121223 495 ntBASIC5.63□□□□□ -1.51
Sdc1P18828 Rpl10-ps6-201ENSMUST00000121321 642 ntBASIC5.63□□□□□ -1.51
Sdc1P18828 Mir1903-201ENSMUST00000122574 80 ntBASIC5.63□□□□□ -1.51
Sdc1P18828 Gm10913-201ENSMUST00000133732 463 ntBASIC5.63□□□□□ -1.51
Sdc1P18828 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sdc1P18828 Mgst1-207ENSMUST00000140932 742 ntTSL 3 BASIC5.63□□□□□ -1.51
Sdc1P18828 Gm11827-201ENSMUST00000142297 1257 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sdc1P18828 Gm14225-201ENSMUST00000142310 539 ntTSL 2 BASIC5.63□□□□□ -1.51
Sdc1P18828 Apela-202ENSMUST00000142822 975 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sdc1P18828 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sdc1P18828 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sdc1P18828 Bud31-207ENSMUST00000162594 867 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
Sdc1P18828 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC5.63□□□□□ -1.51
Sdc1P18828 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sdc1P18828 Gm4891-201ENSMUST00000182279 912 ntBASIC5.63□□□□□ -1.51
Sdc1P18828 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC5.63□□□□□ -1.51
Sdc1P18828 Gm43103-201ENSMUST00000199021 802 ntBASIC5.63□□□□□ -1.51
Sdc1P18828 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sdc1P18828 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sdc1P18828 Olfr326-ps1-201ENSMUST00000204790 392 ntBASIC5.63□□□□□ -1.51
Sdc1P18828 Gm18781-201ENSMUST00000211252 924 ntBASIC5.63□□□□□ -1.51
Sdc1P18828 Rpl10-ps5-201ENSMUST00000212707 642 ntBASIC5.63□□□□□ -1.51
Sdc1P18828 AL713985.1-201ENSMUST00000219030 420 ntBASIC5.63□□□□□ -1.51
Sdc1P18828 Gm3379-201ENSMUST00000222259 642 ntBASIC5.63□□□□□ -1.51
Sdc1P18828 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC5.63□□□□□ -1.51
Sdc1P18828 AC124715.2-201ENSMUST00000226762 617 ntBASIC5.63□□□□□ -1.51
Sdc1P18828 AC122251.2-201ENSMUST00000227341 603 ntBASIC5.63□□□□□ -1.51
Sdc1P18828 4930553J12Rik-201ENSMUST00000023648 381 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Sdc1P18828 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 103.5 ms