Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm20500-201ENSMUST00000174621 321 ntTSL 3 BASIC5.81□□□□□ -1.48
Cdx1P18111 Gm23617-201ENSMUST00000175410 95 ntBASIC5.81□□□□□ -1.48
Cdx1P18111 Gm24465-201ENSMUST00000178398 107 ntBASIC5.81□□□□□ -1.48
Cdx1P18111 Mlip-212ENSMUST00000184848 1019 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Cdx1P18111 Gm28888-201ENSMUST00000186556 316 ntTSL 3 BASIC5.81□□□□□ -1.48
Cdx1P18111 Gm28973-201ENSMUST00000189310 613 ntBASIC5.81□□□□□ -1.48
Cdx1P18111 Gm36991-201ENSMUST00000191800 648 ntBASIC5.81□□□□□ -1.48
Cdx1P18111 Gm37585-201ENSMUST00000195440 280 ntBASIC5.81□□□□□ -1.48
Cdx1P18111 Gm43664-201ENSMUST00000196038 734 ntBASIC5.81□□□□□ -1.48
Cdx1P18111 Gm22711-202ENSMUST00000197029 135 ntBASIC5.81□□□□□ -1.48
Cdx1P18111 4933439J24Rik-201ENSMUST00000200866 853 ntBASIC5.81□□□□□ -1.48
Cdx1P18111 Gm43008-201ENSMUST00000202346 286 ntBASIC5.81□□□□□ -1.48
Cdx1P18111 Gm5314-201ENSMUST00000204852 466 ntBASIC5.81□□□□□ -1.48
Cdx1P18111 Gm5535-206ENSMUST00000210067 679 ntTSL 5 BASIC5.81□□□□□ -1.48
Cdx1P18111 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC5.81□□□□□ -1.48
Cdx1P18111 AC154307.1-201ENSMUST00000214799 90 ntBASIC5.81□□□□□ -1.48
Cdx1P18111 Gm21941-201ENSMUST00000221121 562 ntBASIC5.81□□□□□ -1.48
Cdx1P18111 AC139941.1-201ENSMUST00000221517 478 ntBASIC5.81□□□□□ -1.48
Cdx1P18111 AC122251.2-201ENSMUST00000227341 603 ntBASIC5.81□□□□□ -1.48
Cdx1P18111 AC154484.2-201ENSMUST00000228359 818 ntBASIC5.81□□□□□ -1.48
Cdx1P18111 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdx1P18111 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdx1P18111 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdx1P18111 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdx1P18111 Gm14324-201ENSMUST00000121358 3051 ntBASIC5.81□□□□□ -1.48
Cdx1P18111 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdx1P18111 Bmpr1a-202ENSMUST00000165280 1945 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Cdx1P18111 Gm5903-201ENSMUST00000121836 2325 ntBASIC5.81□□□□□ -1.48
Cdx1P18111 AC154270.2-201ENSMUST00000226755 2306 ntBASIC5.81□□□□□ -1.48
Cdx1P18111 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Cdx1P18111 Slc51a-201ENSMUST00000042042 1600 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdx1P18111 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdx1P18111 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Cdx1P18111 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Cdx1P18111 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Cdx1P18111 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Cdx1P18111 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
Cdx1P18111 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Cdx1P18111 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Cdx1P18111 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
Cdx1P18111 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Cdx1P18111 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Cdx1P18111 Mir763-201ENSMUST00000103249 120 ntBASIC5.8□□□□□ -1.48
Cdx1P18111 Gm25725-201ENSMUST00000104528 130 ntBASIC5.8□□□□□ -1.48
Cdx1P18111 Zfp467-207ENSMUST00000114563 463 ntTSL 5 BASIC5.8□□□□□ -1.48
Cdx1P18111 Gm11558-201ENSMUST00000118454 459 ntBASIC5.8□□□□□ -1.48
Cdx1P18111 Gm15665-201ENSMUST00000119116 847 ntBASIC5.8□□□□□ -1.48
Cdx1P18111 Gm13649-201ENSMUST00000122325 606 ntBASIC5.8□□□□□ -1.48
Cdx1P18111 Gm6689-201ENSMUST00000130905 481 ntBASIC5.8□□□□□ -1.48
Cdx1P18111 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Cdx1P18111 Gm22670-201ENSMUST00000158724 143 ntBASIC5.8□□□□□ -1.48
Cdx1P18111 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Cdx1P18111 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Cdx1P18111 Mocs2-212ENSMUST00000184214 551 ntTSL 3 BASIC5.8□□□□□ -1.48
Cdx1P18111 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC5.8□□□□□ -1.48
Cdx1P18111 Gm28264-201ENSMUST00000190657 398 ntTSL 5 BASIC5.8□□□□□ -1.48
Cdx1P18111 Gm18797-201ENSMUST00000190809 1174 ntBASIC5.8□□□□□ -1.48
Cdx1P18111 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Cdx1P18111 Gm29250-201ENSMUST00000191372 368 ntTSL 5 BASIC5.8□□□□□ -1.48
Cdx1P18111 Gm38305-201ENSMUST00000194825 223 ntBASIC5.8□□□□□ -1.48
Cdx1P18111 Gm1647-201ENSMUST00000195406 735 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Cdx1P18111 Mir7230-201ENSMUST00000195977 56 ntBASIC5.8□□□□□ -1.48
Cdx1P18111 Gm43390-201ENSMUST00000196614 421 ntBASIC5.8□□□□□ -1.48
Cdx1P18111 Gm30613-201ENSMUST00000197277 512 ntTSL 3 BASIC5.8□□□□□ -1.48
Cdx1P18111 Gm20274-201ENSMUST00000206967 584 ntBASIC5.8□□□□□ -1.48
Cdx1P18111 AC154249.1-201ENSMUST00000226296 320 ntBASIC5.8□□□□□ -1.48
Cdx1P18111 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Cdx1P18111 9230104L09Rik-201ENSMUST00000028937 661 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Cdx1P18111 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Cdx1P18111 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Cdx1P18111 Gm10123-201ENSMUST00000075723 490 ntBASIC5.8□□□□□ -1.48
Cdx1P18111 Rpl31-ps20-201ENSMUST00000080982 378 ntBASIC5.8□□□□□ -1.48
Cdx1P18111 Gm4956-201ENSMUST00000082032 1148 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Cdx1P18111 Snora9-201ENSMUST00000082579 133 ntBASIC5.8□□□□□ -1.48
Cdx1P18111 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Cdx1P18111 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Cdx1P18111 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Cdx1P18111 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Cdx1P18111 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC5.8□□□□□ -1.48
Cdx1P18111 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Cdx1P18111 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC5.8□□□□□ -1.48
Cdx1P18111 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC5.8□□□□□ -1.48
Cdx1P18111 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC5.8□□□□□ -1.48
Cdx1P18111 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Cdx1P18111 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Cdx1P18111 Gm45457-201ENSMUST00000209931 3089 ntBASIC5.8□□□□□ -1.48
Cdx1P18111 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Cdx1P18111 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Cdx1P18111 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Cdx1P18111 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Cdx1P18111 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC5.8□□□□□ -1.48
Cdx1P18111 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Cdx1P18111 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Cdx1P18111 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC5.79□□□□□ -1.48
Cdx1P18111 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Cdx1P18111 Kcne3-203ENSMUST00000178946 1323 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Cdx1P18111 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC5.79□□□□□ -1.48
Cdx1P18111 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC5.79□□□□□ -1.48
Cdx1P18111 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Cdx1P18111 EU599041-203ENSMUST00000205748 1492 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms