Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC6.69□□□□□ -1.34
Hoxd3P09027 Gm37715-201ENSMUST00000193206 235 ntBASIC6.69□□□□□ -1.34
Hoxd3P09027 Gm38306-201ENSMUST00000193954 237 ntBASIC6.69□□□□□ -1.34
Hoxd3P09027 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC6.69□□□□□ -1.34
Hoxd3P09027 Gm42896-201ENSMUST00000201249 1113 ntBASIC6.69□□□□□ -1.34
Hoxd3P09027 Gm44142-201ENSMUST00000203358 311 ntBASIC6.69□□□□□ -1.34
Hoxd3P09027 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC6.69□□□□□ -1.34
Hoxd3P09027 Gm18672-201ENSMUST00000208035 270 ntBASIC6.69□□□□□ -1.34
Hoxd3P09027 Gm4536-201ENSMUST00000209157 542 ntBASIC6.69□□□□□ -1.34
Hoxd3P09027 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC6.69□□□□□ -1.34
Hoxd3P09027 Gm5831-201ENSMUST00000216016 1209 ntBASIC6.69□□□□□ -1.34
Hoxd3P09027 Olfr977-ps1-201ENSMUST00000217438 943 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Hoxd3P09027 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC6.69□□□□□ -1.34
Hoxd3P09027 CT030030.1-201ENSMUST00000218809 152 ntBASIC6.69□□□□□ -1.34
Hoxd3P09027 AC162934.2-201ENSMUST00000221451 249 ntBASIC6.69□□□□□ -1.34
Hoxd3P09027 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC6.69□□□□□ -1.34
Hoxd3P09027 AC161374.2-201ENSMUST00000223662 596 ntBASIC6.69□□□□□ -1.34
Hoxd3P09027 AC091783.3-201ENSMUST00000223969 681 ntBASIC6.69□□□□□ -1.34
Hoxd3P09027 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC6.69□□□□□ -1.34
Hoxd3P09027 Llcfc1-201ENSMUST00000031900 741 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Hoxd3P09027 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Hoxd3P09027 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Hoxd3P09027 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC6.69□□□□□ -1.34
Hoxd3P09027 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Hoxd3P09027 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Hoxd3P09027 Olfr51-201ENSMUST00000076514 924 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Hoxd3P09027 Olfr285-201ENSMUST00000079736 960 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Hoxd3P09027 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Hoxd3P09027 Clec3a-201ENSMUST00000009018 591 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Hoxd3P09027 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Hoxd3P09027 Dlc1-206ENSMUST00000163663 5113 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Hoxd3P09027 Gm43323-201ENSMUST00000202328 4258 ntBASIC6.69□□□□□ -1.34
Hoxd3P09027 Myom1-202ENSMUST00000073211 5602 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
Hoxd3P09027 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Hoxd3P09027 Uroc1-202ENSMUST00000164761 3462 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Hoxd3P09027 Tango2-201ENSMUST00000115628 1507 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Hoxd3P09027 Ttll4-201ENSMUST00000042125 10019 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Hoxd3P09027 Taf1-202ENSMUST00000118878 7210 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Hoxd3P09027 Cecr2-201ENSMUST00000100993 4849 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Hoxd3P09027 Ncam1-202ENSMUST00000166811 3088 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Hoxd3P09027 Afap1l2-202ENSMUST00000118800 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Hoxd3P09027 Gm26856-201ENSMUST00000181919 1349 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Hoxd3P09027 Itgb1bp2-201ENSMUST00000033674 1314 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Hoxd3P09027 Dnajb5-202ENSMUST00000084662 3302 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Hoxd3P09027 Htr1d-202ENSMUST00000117699 2244 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Hoxd3P09027 Zp2-201ENSMUST00000033207 2221 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Hoxd3P09027 Gm37842-201ENSMUST00000192330 1569 ntBASIC6.69□□□□□ -1.34
Hoxd3P09027 Gm18259-201ENSMUST00000220991 2010 ntBASIC6.69□□□□□ -1.34
Hoxd3P09027 AC118222.1-201ENSMUST00000222184 2973 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Hoxd3P09027 4930543N07Rik-201ENSMUST00000209357 1364 ntTSL 5 BASIC6.69□□□□□ -1.34
Hoxd3P09027 Lmx1a-202ENSMUST00000111377 3200 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Hoxd3P09027 Gm37110-201ENSMUST00000192993 1628 ntBASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm43613-201ENSMUST00000199409 1613 ntBASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm44183-201ENSMUST00000203964 1628 ntBASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm5743-202ENSMUST00000212004 1647 ntBASIC6.68□□□□□ -1.34
Hoxd3P09027 Npy5r-201ENSMUST00000070810 2314 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxd3P09027 Lyrm1-205ENSMUST00000207270 5845 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxd3P09027 Rtl5-201ENSMUST00000113631 4653 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Hoxd3P09027 Mamdc4-201ENSMUST00000095117 3990 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
Hoxd3P09027 Olfr467-203ENSMUST00000214253 1855 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Hoxd3P09027 Unc45b-201ENSMUST00000018989 3549 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxd3P09027 AC154634.1-201ENSMUST00000225225 2394 ntBASIC6.68□□□□□ -1.34
Hoxd3P09027 Olfr775-202ENSMUST00000214109 3598 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Hoxd3P09027 Wdr12-203ENSMUST00000122038 2850 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxd3P09027 Cd4-201ENSMUST00000024044 3108 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Hoxd3P09027 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC6.68□□□□□ -1.34
Hoxd3P09027 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxd3P09027 Ceacam1-202ENSMUST00000098668 1478 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm34297-201ENSMUST00000218569 1980 ntTSL 5 BASIC6.68□□□□□ -1.34
Hoxd3P09027 Mill2-205ENSMUST00000227379 1998 ntAPPRIS ALT2 BASIC6.68□□□□□ -1.34
Hoxd3P09027 Tmcc3-202ENSMUST00000117460 3217 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxd3P09027 Gsap-201ENSMUST00000036031 3745 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxd3P09027 Add1-205ENSMUST00000114340 3761 ntAPPRIS P3 TSL 5 BASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxd3P09027 Dctn5-201ENSMUST00000033156 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxd3P09027 Rab43-201ENSMUST00000032134 4308 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm37549-201ENSMUST00000194096 4065 ntBASIC6.68□□□□□ -1.34
Hoxd3P09027 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Hoxd3P09027 Ighv14-2-201ENSMUST00000103467 351 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Hoxd3P09027 Rpl23a-ps3-201ENSMUST00000104925 468 ntBASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm12520-201ENSMUST00000117493 316 ntBASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm12917-201ENSMUST00000119850 639 ntBASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm14911-201ENSMUST00000120803 989 ntBASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm12332-201ENSMUST00000121397 922 ntBASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm14530-201ENSMUST00000122391 333 ntBASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm15873-201ENSMUST00000123390 761 ntTSL 3 BASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm9785-202ENSMUST00000144563 593 ntBASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm15389-201ENSMUST00000153774 666 ntTSL 3 BASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm22491-201ENSMUST00000157190 102 ntBASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm6808-201ENSMUST00000162341 807 ntBASIC6.68□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms