Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Gm8667-201ENSMUST00000211112 449 ntBASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 CT030184.2-201ENSMUST00000223064 263 ntBASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 CT009728.1-201ENSMUST00000225228 1050 ntBASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Gm6807-201ENSMUST00000077435 888 ntBASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Gm10145-201ENSMUST00000077776 462 ntBASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Gm3383-201ENSMUST00000096171 748 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Gm10705-201ENSMUST00000098980 461 ntBASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC7.71□□□□□ -1.18
Ddx56Q9D0R4 Gm37107-201ENSMUST00000195326 2552 ntBASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Gm42455-201ENSMUST00000199761 2736 ntBASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Gm13163-201ENSMUST00000119875 336 ntBASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Gm12307-201ENSMUST00000120581 590 ntBASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Gm7350-201ENSMUST00000120964 636 ntBASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Gm7991-201ENSMUST00000168668 591 ntBASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Gm6536-201ENSMUST00000171180 615 ntBASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Olfr1348-204ENSMUST00000208066 1135 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 E230032D23Rik-203ENSMUST00000208797 856 ntBASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Gm45478-201ENSMUST00000209472 211 ntBASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 AC124778.1-201ENSMUST00000216013 162 ntBASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Gm19212-201ENSMUST00000216642 862 ntBASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Gm18510-201ENSMUST00000219335 1096 ntBASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 AC211878.6-201ENSMUST00000221896 358 ntBASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Olfr1278-205ENSMUST00000215210 6901 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Gm37364-201ENSMUST00000192533 3920 ntBASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Gm40778-201ENSMUST00000217825 1344 ntBASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Gm44022-201ENSMUST00000203708 5429 ntBASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ddx56Q9D0R4 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Gm14280-201ENSMUST00000138080 1444 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 AC166574.5-201ENSMUST00000227438 1432 ntBASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms