Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Gm25916-201ENSMUST00000104263 131 ntBASIC6.95□□□□□ -1.3
Msh4Q99MT2 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Gm14279-201ENSMUST00000117142 332 ntBASIC6.95□□□□□ -1.3
Msh4Q99MT2 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC6.95□□□□□ -1.3
Msh4Q99MT2 Gm10243-201ENSMUST00000117571 333 ntBASIC6.95□□□□□ -1.3
Msh4Q99MT2 Gm12710-201ENSMUST00000119011 216 ntBASIC6.95□□□□□ -1.3
Msh4Q99MT2 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC6.95□□□□□ -1.3
Msh4Q99MT2 Gm5255-201ENSMUST00000120125 642 ntBASIC6.95□□□□□ -1.3
Msh4Q99MT2 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC6.95□□□□□ -1.3
Msh4Q99MT2 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC6.95□□□□□ -1.3
Msh4Q99MT2 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC6.95□□□□□ -1.3
Msh4Q99MT2 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Gm22915-201ENSMUST00000157615 136 ntBASIC6.95□□□□□ -1.3
Msh4Q99MT2 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Gm3611-201ENSMUST00000173687 877 ntBASIC6.95□□□□□ -1.3
Msh4Q99MT2 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Gm6489-201ENSMUST00000178167 696 ntBASIC6.95□□□□□ -1.3
Msh4Q99MT2 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Gm7481-201ENSMUST00000182020 995 ntBASIC6.95□□□□□ -1.3
Msh4Q99MT2 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Gm6472-202ENSMUST00000187973 582 ntBASIC6.95□□□□□ -1.3
Msh4Q99MT2 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC6.95□□□□□ -1.3
Msh4Q99MT2 Gm35108-201ENSMUST00000194321 699 ntBASIC6.95□□□□□ -1.3
Msh4Q99MT2 Gm33191-201ENSMUST00000195604 699 ntBASIC6.95□□□□□ -1.3
Msh4Q99MT2 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC6.95□□□□□ -1.3
Msh4Q99MT2 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC6.95□□□□□ -1.3
Msh4Q99MT2 AC117949.1-201ENSMUST00000225547 419 ntBASIC6.95□□□□□ -1.3
Msh4Q99MT2 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Gm10247-201ENSMUST00000090395 333 ntBASIC6.95□□□□□ -1.3
Msh4Q99MT2 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Msh4Q99MT2 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC6.95□□□□□ -1.3
Msh4Q99MT2 Gm44436-201ENSMUST00000204200 1494 ntBASIC6.95□□□□□ -1.3
Msh4Q99MT2 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Msh4Q99MT2 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Gm45657-201ENSMUST00000211318 1349 ntBASIC6.95□□□□□ -1.3
Msh4Q99MT2 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Msh4Q99MT2 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Msh4Q99MT2 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Msh4Q99MT2 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC6.94□□□□□ -1.3
Msh4Q99MT2 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Msh4Q99MT2 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Msh4Q99MT2 AC123705.1-201ENSMUST00000222512 2058 ntBASIC6.94□□□□□ -1.3
Msh4Q99MT2 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC6.94□□□□□ -1.3
Msh4Q99MT2 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Msh4Q99MT2 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Msh4Q99MT2 Gm36930-201ENSMUST00000195431 2376 ntBASIC6.94□□□□□ -1.3
Msh4Q99MT2 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Msh4Q99MT2 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Msh4Q99MT2 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Msh4Q99MT2 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Msh4Q99MT2 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Msh4Q99MT2 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Msh4Q99MT2 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC6.94□□□□□ -1.3
Msh4Q99MT2 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Msh4Q99MT2 Gm14202-201ENSMUST00000120121 311 ntBASIC6.94□□□□□ -1.3
Msh4Q99MT2 Gm22342-201ENSMUST00000122647 298 ntBASIC6.94□□□□□ -1.3
Msh4Q99MT2 Gm22262-201ENSMUST00000158713 86 ntBASIC6.94□□□□□ -1.3
Msh4Q99MT2 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Msh4Q99MT2 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC6.94□□□□□ -1.3
Msh4Q99MT2 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
Msh4Q99MT2 Gm27218-201ENSMUST00000183745 392 ntBASIC6.94□□□□□ -1.3
Msh4Q99MT2 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC6.94□□□□□ -1.3
Msh4Q99MT2 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Msh4Q99MT2 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC6.94□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms