Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Ccdc28bQ8CEG5 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ccdc28bQ8CEG5 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ccdc28bQ8CEG5 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC6.96□□□□□ -1.29
Ccdc28bQ8CEG5 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.29
Ccdc28bQ8CEG5 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Ccdc28bQ8CEG5 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC6.96□□□□□ -1.29
Ccdc28bQ8CEG5 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC6.96□□□□□ -1.29
Ccdc28bQ8CEG5 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Ccdc28bQ8CEG5 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Ccdc28bQ8CEG5 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Ccdc28bQ8CEG5 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 Gm45786-201ENSMUST00000213021 2278 ntBASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 AC125328.1-201ENSMUST00000226812 2265 ntBASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 Gm5915-201ENSMUST00000116136 454 ntBASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 Gm14032-201ENSMUST00000117686 1026 ntBASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 Gm14251-201ENSMUST00000122133 279 ntBASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 Gm4613-201ENSMUST00000165488 276 ntBASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 Anks1b-209ENSMUST00000182083 416 ntTSL 2 BASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 Gm28164-201ENSMUST00000190143 442 ntBASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 Gm43699-201ENSMUST00000201312 818 ntTSL 3 BASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 Mrps33-204ENSMUST00000201461 717 ntTSL 2 BASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 Gm4780-201ENSMUST00000213206 1242 ntBASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 Gm5119-201ENSMUST00000215858 634 ntBASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 Gm2840-201ENSMUST00000048361 411 ntBASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 Gm42595-201ENSMUST00000196771 1607 ntBASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 AC158115.1-201ENSMUST00000222830 3182 ntBASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 Zim1-202ENSMUST00000122432 3060 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc28bQ8CEG5 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 9630002D21Rik-201ENSMUST00000221128 1351 ntTSL 5 BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Gm43335-201ENSMUST00000198299 3276 ntBASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Gm26945-201ENSMUST00000183191 2011 ntBASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Gm24462-201ENSMUST00000102430 106 ntBASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Gm15203-201ENSMUST00000117668 455 ntBASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Gm14787-201ENSMUST00000121236 388 ntBASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Gm26980-201ENSMUST00000183321 395 ntBASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 4930449E01Rik-202ENSMUST00000188698 532 ntTSL 3 BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Gm18207-201ENSMUST00000205486 526 ntBASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Gm44691-201ENSMUST00000207562 324 ntTSL 5 BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Gm45506-201ENSMUST00000211620 280 ntBASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 AC132446.1-201ENSMUST00000222655 226 ntBASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 AC131745.3-201ENSMUST00000223582 554 ntBASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Lyzl1-201ENSMUST00000025076 846 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Klk4-201ENSMUST00000007161 1249 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Gm16020-201ENSMUST00000084281 210 ntBASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Olfr1424-201ENSMUST00000087830 942 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms