Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim9Q8C7M3 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
Trim9Q8C7M3 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim9Q8C7M3 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim9Q8C7M3 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim9Q8C7M3 Mir760-201ENSMUST00000103257 119 ntBASIC7.77□□□□□ -1.17
Trim9Q8C7M3 Lrrc51-203ENSMUST00000106963 835 ntTSL 2 BASIC7.77□□□□□ -1.17
Trim9Q8C7M3 Lrrc51-204ENSMUST00000106964 872 ntTSL 2 BASIC7.77□□□□□ -1.17
Trim9Q8C7M3 Gm13463-201ENSMUST00000119020 233 ntBASIC7.77□□□□□ -1.17
Trim9Q8C7M3 Gm4887-201ENSMUST00000122230 1053 ntBASIC7.77□□□□□ -1.17
Trim9Q8C7M3 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim9Q8C7M3 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC7.77□□□□□ -1.17
Trim9Q8C7M3 Gm24286-201ENSMUST00000157632 128 ntBASIC7.77□□□□□ -1.17
Trim9Q8C7M3 Gm7420-201ENSMUST00000162836 842 ntBASIC7.77□□□□□ -1.17
Trim9Q8C7M3 Gm5300-201ENSMUST00000182201 1003 ntBASIC7.77□□□□□ -1.17
Trim9Q8C7M3 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim9Q8C7M3 Gm29999-202ENSMUST00000193554 671 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim9Q8C7M3 Gm26413-201ENSMUST00000196783 126 ntBASIC7.77□□□□□ -1.17
Trim9Q8C7M3 Gm43147-201ENSMUST00000196944 542 ntBASIC7.77□□□□□ -1.17
Trim9Q8C7M3 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC7.77□□□□□ -1.17
Trim9Q8C7M3 Gm8539-201ENSMUST00000199822 501 ntBASIC7.77□□□□□ -1.17
Trim9Q8C7M3 Gm3511-201ENSMUST00000199823 204 ntBASIC7.77□□□□□ -1.17
Trim9Q8C7M3 AC159188.3-201ENSMUST00000224199 880 ntBASIC7.77□□□□□ -1.17
Trim9Q8C7M3 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim9Q8C7M3 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim9Q8C7M3 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Trim9Q8C7M3 n-R5s29-201ENSMUST00000082836 119 ntBASIC7.77□□□□□ -1.17
Trim9Q8C7M3 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim9Q8C7M3 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim9Q8C7M3 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim9Q8C7M3 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Trim9Q8C7M3 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim9Q8C7M3 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim9Q8C7M3 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
Trim9Q8C7M3 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Trim9Q8C7M3 Gm9030-201ENSMUST00000218405 2410 ntBASIC7.77□□□□□ -1.17
Trim9Q8C7M3 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Trim9Q8C7M3 Gm9029-201ENSMUST00000219232 2410 ntBASIC7.77□□□□□ -1.17
Trim9Q8C7M3 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Trim9Q8C7M3 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Trim9Q8C7M3 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim9Q8C7M3 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim9Q8C7M3 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim9Q8C7M3 Gm37373-201ENSMUST00000194005 2812 ntBASIC7.76□□□□□ -1.17
Trim9Q8C7M3 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim9Q8C7M3 Gm44286-201ENSMUST00000204098 1487 ntBASIC7.76□□□□□ -1.17
Trim9Q8C7M3 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC7.76□□□□□ -1.17
Trim9Q8C7M3 AC105407.2-205ENSMUST00000224680 2733 ntBASIC7.76□□□□□ -1.17
Trim9Q8C7M3 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim9Q8C7M3 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim9Q8C7M3 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC7.76□□□□□ -1.17
Trim9Q8C7M3 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC7.76□□□□□ -1.17
Trim9Q8C7M3 Gm16284-201ENSMUST00000140995 400 ntBASIC7.76□□□□□ -1.17
Trim9Q8C7M3 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC7.76□□□□□ -1.17
Trim9Q8C7M3 Gm8988-201ENSMUST00000155015 1240 ntBASIC7.76□□□□□ -1.17
Trim9Q8C7M3 Gm4956-202ENSMUST00000178869 672 ntBASIC7.76□□□□□ -1.17
Trim9Q8C7M3 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC7.76□□□□□ -1.17
Trim9Q8C7M3 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim9Q8C7M3 Gm38373-201ENSMUST00000192042 288 ntBASIC7.76□□□□□ -1.17
Trim9Q8C7M3 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC7.76□□□□□ -1.17
Trim9Q8C7M3 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
Trim9Q8C7M3 Dcp2-202ENSMUST00000202306 398 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim9Q8C7M3 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim9Q8C7M3 Gm44251-201ENSMUST00000204963 442 ntBASIC7.76□□□□□ -1.17
Trim9Q8C7M3 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC7.76□□□□□ -1.17
Trim9Q8C7M3 AL713985.1-201ENSMUST00000219030 420 ntBASIC7.76□□□□□ -1.17
Trim9Q8C7M3 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC7.76□□□□□ -1.17
Trim9Q8C7M3 Gm4796-201ENSMUST00000219802 624 ntBASIC7.76□□□□□ -1.17
Trim9Q8C7M3 Gm7986-201ENSMUST00000221336 551 ntBASIC7.76□□□□□ -1.17
Trim9Q8C7M3 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC7.76□□□□□ -1.17
Trim9Q8C7M3 AC131710.2-201ENSMUST00000226773 683 ntBASIC7.76□□□□□ -1.17
Trim9Q8C7M3 CT009515.1-201ENSMUST00000228127 586 ntBASIC7.76□□□□□ -1.17
Trim9Q8C7M3 Olfr1494-201ENSMUST00000051768 948 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Trim9Q8C7M3 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Trim9Q8C7M3 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim9Q8C7M3 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim9Q8C7M3 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim9Q8C7M3 Gm42636-201ENSMUST00000197174 2239 ntBASIC7.76□□□□□ -1.17
Trim9Q8C7M3 Gm19801-201ENSMUST00000218231 1882 ntBASIC7.76□□□□□ -1.17
Trim9Q8C7M3 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC7.76□□□□□ -1.17
Trim9Q8C7M3 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Trim9Q8C7M3 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim9Q8C7M3 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
Trim9Q8C7M3 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
Trim9Q8C7M3 Gm19024-201ENSMUST00000194681 1319 ntBASIC7.76□□□□□ -1.17
Trim9Q8C7M3 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim9Q8C7M3 AC135669.2-201ENSMUST00000215636 4958 ntBASIC7.76□□□□□ -1.17
Trim9Q8C7M3 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim9Q8C7M3 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim9Q8C7M3 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trim9Q8C7M3 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC7.75□□□□□ -1.17
Trim9Q8C7M3 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trim9Q8C7M3 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Trim9Q8C7M3 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Trim9Q8C7M3 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trim9Q8C7M3 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC7.75□□□□□ -1.17
Trim9Q8C7M3 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Trim9Q8C7M3 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim9Q8C7M3 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trim9Q8C7M3 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 122.8 ms