Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Olfr743-202ENSMUST00000215793 2203 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Olfr374-202ENSMUST00000210435 8718 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Gm22795-201ENSMUST00000157233 118 ntBASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Gm18690-201ENSMUST00000204488 985 ntBASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Gm46124-202ENSMUST00000217260 860 ntTSL 5 BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Gm2089-201ENSMUST00000218294 479 ntBASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 AC154806.1-203ENSMUST00000227370 1032 ntBASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Tiam1-213ENSMUST00000163370 7255 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Gm2654-201ENSMUST00000221381 1592 ntBASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Cfap161-202ENSMUST00000119134 2868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Olfr1509-206ENSMUST00000215030 2525 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Zfp14-202ENSMUST00000207072 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Gm12183-201ENSMUST00000120566 1848 ntBASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Olfr1414-201ENSMUST00000062353 6017 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Olfr169-204ENSMUST00000216070 2328 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Adgrl2-208ENSMUST00000197567 5585 ntAPPRIS P2 TSL 2 BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Gm15203-201ENSMUST00000117668 455 ntBASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Gm15712-201ENSMUST00000120369 1156 ntBASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Gm13578-201ENSMUST00000120849 590 ntBASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Gm23776-201ENSMUST00000158993 325 ntBASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Gm26455-201ENSMUST00000175300 92 ntBASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Gm3678-201ENSMUST00000218888 492 ntBASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 AC164294.1-201ENSMUST00000224682 688 ntBASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 AC131029.2-201ENSMUST00000226696 628 ntBASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Map3k7-204ENSMUST00000108184 5491 ntTSL 5 BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 Chrna2-201ENSMUST00000022620 3554 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 Scn11a-202ENSMUST00000215718 5899 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 Gm9585-201ENSMUST00000219681 1404 ntBASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 Gm43612-201ENSMUST00000196087 3207 ntBASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 Gm44007-201ENSMUST00000203845 2189 ntBASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 Gm42969-201ENSMUST00000199858 3631 ntBASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 Nsd1-207ENSMUST00000224973 9905 ntBASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 Abcb11-204ENSMUST00000180142 4963 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 Fate1-202ENSMUST00000114569 1053 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 Gm15310-201ENSMUST00000117891 372 ntBASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 Gm15311-201ENSMUST00000119682 282 ntBASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 Gm15305-201ENSMUST00000120354 288 ntBASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 Gm12540-201ENSMUST00000121938 319 ntBASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 BC064078-201ENSMUST00000122939 570 ntBASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 Mir7653-201ENSMUST00000184358 61 ntBASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 Gm27998-201ENSMUST00000184902 361 ntBASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 Gm4083-201ENSMUST00000207158 451 ntBASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 AL929555.1-201ENSMUST00000215283 509 ntBASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Col6a6Q8C6K9 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Col6a6Q8C6K9 CT009711.1-201ENSMUST00000223992 3040 ntBASIC6.4□□□□□ -1.39
Col6a6Q8C6K9 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Col6a6Q8C6K9 Atl3-201ENSMUST00000025668 6376 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
Col6a6Q8C6K9 Afm-201ENSMUST00000113179 2038 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Col6a6Q8C6K9 AC093043.2-201ENSMUST00000228616 2017 ntBASIC6.4□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms