Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Nbr1-201ENSMUST00000071537 3239 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Trim35Q8C006 Glp2r-201ENSMUST00000021289 1738 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trim35Q8C006 Pcdhga7-202ENSMUST00000193476 3044 ntAPPRIS ALT2 BASIC9.81□□□□□ -0.84
Trim35Q8C006 Olfr320-202ENSMUST00000214662 3029 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Trim35Q8C006 Ccdc86-201ENSMUST00000025639 3003 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim35Q8C006 P3h1-202ENSMUST00000081606 2820 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim35Q8C006 Kif3a-203ENSMUST00000120613 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim35Q8C006 Map2-206ENSMUST00000114017 4981 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim35Q8C006 Zfp39-201ENSMUST00000102703 3890 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim35Q8C006 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trim35Q8C006 Gm12116-201ENSMUST00000131851 2770 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trim35Q8C006 Cdadc1-202ENSMUST00000056997 2202 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trim35Q8C006 Rnf38-201ENSMUST00000045793 5012 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trim35Q8C006 Fam149b-210ENSMUST00000224721 4483 ntAPPRIS ALT2 BASIC9.8□□□□□ -0.84
Trim35Q8C006 Wdr27-201ENSMUST00000170386 2574 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Trim35Q8C006 Gm18981-201ENSMUST00000185373 1599 ntBASIC9.8□□□□□ -0.84
Trim35Q8C006 Rint1-201ENSMUST00000030852 3298 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trim35Q8C006 Plec-221ENSMUST00000171562 14944 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trim35Q8C006 Plec-204ENSMUST00000072692 14944 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trim35Q8C006 Zfp292-201ENSMUST00000047950 9986 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trim35Q8C006 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trim35Q8C006 Adh1-201ENSMUST00000004232 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trim35Q8C006 Ctse-202ENSMUST00000112411 1837 ntTSL 5 BASIC9.8□□□□□ -0.84
Trim35Q8C006 Pbdc1-201ENSMUST00000033577 2638 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trim35Q8C006 Lysmd4-204ENSMUST00000207823 3772 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
Trim35Q8C006 Pcx-204ENSMUST00000224726 4034 ntAPPRIS P3 BASIC9.8□□□□□ -0.84
Trim35Q8C006 Olfr160-202ENSMUST00000211952 3492 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
Trim35Q8C006 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Trim35Q8C006 Rhox10-201ENSMUST00000115150 763 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trim35Q8C006 Gm13679-201ENSMUST00000118678 484 ntBASIC9.8□□□□□ -0.84
Trim35Q8C006 Gm12891-201ENSMUST00000119358 240 ntBASIC9.8□□□□□ -0.84
Trim35Q8C006 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC9.8□□□□□ -0.84
Trim35Q8C006 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC9.8□□□□□ -0.84
Trim35Q8C006 Gm12977-201ENSMUST00000133742 942 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trim35Q8C006 Gm13778-202ENSMUST00000146633 537 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trim35Q8C006 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC9.8□□□□□ -0.84
Trim35Q8C006 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC9.8□□□□□ -0.84
Trim35Q8C006 Gm23259-201ENSMUST00000158318 303 ntBASIC9.8□□□□□ -0.84
Trim35Q8C006 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC9.8□□□□□ -0.84
Trim35Q8C006 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trim35Q8C006 Gm18604-201ENSMUST00000172535 558 ntBASIC9.8□□□□□ -0.84
Trim35Q8C006 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC9.8□□□□□ -0.84
Trim35Q8C006 Mir5128-201ENSMUST00000175217 84 ntBASIC9.8□□□□□ -0.84
Trim35Q8C006 Gm23521-201ENSMUST00000177845 110 ntBASIC9.8□□□□□ -0.84
Trim35Q8C006 1700030N03Rik-206ENSMUST00000191405 651 ntTSL 3 BASIC9.8□□□□□ -0.84
Trim35Q8C006 Gm42687-201ENSMUST00000199075 164 ntBASIC9.8□□□□□ -0.84
Trim35Q8C006 Gm43726-201ENSMUST00000199110 775 ntBASIC9.8□□□□□ -0.84
Trim35Q8C006 Gm43709-201ENSMUST00000199870 559 ntBASIC9.8□□□□□ -0.84
Trim35Q8C006 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC9.8□□□□□ -0.84
Trim35Q8C006 Gm45198-201ENSMUST00000206796 591 ntBASIC9.8□□□□□ -0.84
Trim35Q8C006 Lysmd4-203ENSMUST00000207757 631 ntAPPRIS ALT2 TSL 3 BASIC9.8□□□□□ -0.84
Trim35Q8C006 Gm44917-201ENSMUST00000208798 520 ntBASIC9.8□□□□□ -0.84
Trim35Q8C006 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trim35Q8C006 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trim35Q8C006 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC9.8□□□□□ -0.84
Trim35Q8C006 AC124356.1-201ENSMUST00000221469 698 ntBASIC9.8□□□□□ -0.84
Trim35Q8C006 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC9.8□□□□□ -0.84
Trim35Q8C006 AC161581.1-201ENSMUST00000228696 318 ntBASIC9.8□□□□□ -0.84
Trim35Q8C006 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trim35Q8C006 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Trim35Q8C006 Gm8894-201ENSMUST00000074642 666 ntBASIC9.8□□□□□ -0.84
Trim35Q8C006 Gm26205-201ENSMUST00000082907 134 ntBASIC9.8□□□□□ -0.84
Trim35Q8C006 Flad1-201ENSMUST00000050398 3007 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trim35Q8C006 Crx-201ENSMUST00000044434 2919 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trim35Q8C006 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trim35Q8C006 Rhof-204ENSMUST00000186469 4241 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trim35Q8C006 Gm10251-202ENSMUST00000181786 1688 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trim35Q8C006 Sez6l2-203ENSMUST00000106335 3732 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trim35Q8C006 Gm11756-201ENSMUST00000107310 1312 ntAPPRIS P5 TSL 5 BASIC9.8□□□□□ -0.84
Trim35Q8C006 Nell1-202ENSMUST00000107603 2756 ntTSL 5 BASIC9.8□□□□□ -0.84
Trim35Q8C006 Prokr1-203ENSMUST00000204682 4230 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trim35Q8C006 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC9.79□□□□□ -0.84
Trim35Q8C006 Ctnnd1-218ENSMUST00000111692 6170 ntAPPRIS ALT1 TSL 5 BASIC9.79□□□□□ -0.84
Trim35Q8C006 Rexo5-203ENSMUST00000106520 2492 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Trim35Q8C006 Gm37039-201ENSMUST00000193733 2485 ntBASIC9.79□□□□□ -0.84
Trim35Q8C006 Anapc1-203ENSMUST00000110333 4214 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trim35Q8C006 Akt2-204ENSMUST00000108343 3122 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Trim35Q8C006 Gm5281-201ENSMUST00000197542 2134 ntBASIC9.79□□□□□ -0.84
Trim35Q8C006 4933416O17Rik-201ENSMUST00000220972 2122 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trim35Q8C006 Gemin8-201ENSMUST00000056410 1862 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trim35Q8C006 Prdm16-204ENSMUST00000105636 8426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trim35Q8C006 Nup155-201ENSMUST00000163765 6402 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trim35Q8C006 Gm16299-201ENSMUST00000162724 2766 ntTSL 3 BASIC9.79□□□□□ -0.84
Trim35Q8C006 Gm7988-201ENSMUST00000196623 2297 ntBASIC9.79□□□□□ -0.84
Trim35Q8C006 Etos1-201ENSMUST00000057134 2015 ntBASIC9.79□□□□□ -0.84
Trim35Q8C006 Slc17a3-203ENSMUST00000110422 1764 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Trim35Q8C006 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trim35Q8C006 Gcom1-204ENSMUST00000166843 1521 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Trim35Q8C006 Gm15084-201ENSMUST00000178585 1502 ntBASIC9.79□□□□□ -0.84
Trim35Q8C006 Gm38246-201ENSMUST00000194318 1511 ntBASIC9.79□□□□□ -0.84
Trim35Q8C006 AC107232.1-201ENSMUST00000227785 1503 ntBASIC9.79□□□□□ -0.84
Trim35Q8C006 Gm13254-201ENSMUST00000118295 654 ntBASIC9.79□□□□□ -0.84
Trim35Q8C006 Gm15132-201ENSMUST00000118581 652 ntBASIC9.79□□□□□ -0.84
Trim35Q8C006 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trim35Q8C006 Gm12420-201ENSMUST00000119869 1048 ntBASIC9.79□□□□□ -0.84
Trim35Q8C006 Gm15815-201ENSMUST00000120569 255 ntBASIC9.79□□□□□ -0.84
Trim35Q8C006 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC9.79□□□□□ -0.84
Trim35Q8C006 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Trim35Q8C006 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC9.79□□□□□ -0.84
Trim35Q8C006 Anapc1-201ENSMUST00000014499 8942 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms