Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 AC121542.2-201ENSMUST00000227529 400 ntBASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Cldn10-202ENSMUST00000071546 1031 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 AC167013.5-201ENSMUST00000227597 2947 ntBASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Ccdc40Q8BI79 AU020206-202ENSMUST00000206358 3009 ntBASIC7.46□□□□□ -1.21
Ccdc40Q8BI79 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
Ccdc40Q8BI79 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
Ccdc40Q8BI79 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC7.46□□□□□ -1.21
Ccdc40Q8BI79 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC7.46□□□□□ -1.21
Ccdc40Q8BI79 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC7.46□□□□□ -1.21
Ccdc40Q8BI79 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC7.46□□□□□ -1.21
Ccdc40Q8BI79 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC7.46□□□□□ -1.21
Ccdc40Q8BI79 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
Ccdc40Q8BI79 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Ccdc40Q8BI79 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC7.46□□□□□ -1.21
Ccdc40Q8BI79 Gm43168-201ENSMUST00000201039 1612 ntBASIC7.46□□□□□ -1.21
Ccdc40Q8BI79 AC139941.2-201ENSMUST00000221565 1824 ntBASIC7.46□□□□□ -1.21
Ccdc40Q8BI79 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ccdc40Q8BI79 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ccdc40Q8BI79 Igkv8-30-201ENSMUST00000103378 368 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Ccdc40Q8BI79 Gm12710-201ENSMUST00000119011 216 ntBASIC7.46□□□□□ -1.22
Ccdc40Q8BI79 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Ccdc40Q8BI79 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ccdc40Q8BI79 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC7.46□□□□□ -1.22
Ccdc40Q8BI79 Gm16027-201ENSMUST00000161618 758 ntBASIC7.46□□□□□ -1.22
Ccdc40Q8BI79 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Ccdc40Q8BI79 Gm17973-201ENSMUST00000174509 520 ntBASIC7.46□□□□□ -1.22
Ccdc40Q8BI79 Vmn1r-ps18-201ENSMUST00000176901 876 ntBASIC7.46□□□□□ -1.22
Ccdc40Q8BI79 Mir6409-201ENSMUST00000184957 92 ntBASIC7.46□□□□□ -1.22
Ccdc40Q8BI79 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ccdc40Q8BI79 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC7.46□□□□□ -1.22
Ccdc40Q8BI79 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC7.46□□□□□ -1.22
Ccdc40Q8BI79 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Ccdc40Q8BI79 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ccdc40Q8BI79 AC160028.2-201ENSMUST00000218937 2519 ntBASIC7.46□□□□□ -1.22
Ccdc40Q8BI79 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
Ccdc40Q8BI79 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC7.46□□□□□ -1.22
Ccdc40Q8BI79 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ccdc40Q8BI79 CT025639.1-201ENSMUST00000223906 1375 ntBASIC7.46□□□□□ -1.22
Ccdc40Q8BI79 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 Gm44185-201ENSMUST00000204539 3307 ntBASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 Gm11850-201ENSMUST00000119679 479 ntBASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 Gm6067-201ENSMUST00000121648 491 ntBASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 Gm24139-201ENSMUST00000122780 288 ntBASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 Gm8624-202ENSMUST00000165677 669 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 Gm29435-201ENSMUST00000191310 689 ntBASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 AC157571.1-201ENSMUST00000222014 520 ntBASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 AC159205.2-201ENSMUST00000223759 816 ntBASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 AC157650.2-201ENSMUST00000224666 328 ntBASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 Olfr715-201ENSMUST00000076958 1131 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 Gm6807-201ENSMUST00000077435 888 ntBASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 Gm3383-201ENSMUST00000096171 748 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 Gm26945-201ENSMUST00000183191 2011 ntBASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 AC155234.1-201ENSMUST00000225610 2823 ntBASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ccdc40Q8BI79 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms