Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm13835-201ENSMUST00000118459 685 ntBASIC6.15□□□□□ -1.42
Rif1Q6PR54 Gm12438-201ENSMUST00000122034 336 ntBASIC6.15□□□□□ -1.42
Rif1Q6PR54 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Rif1Q6PR54 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC6.15□□□□□ -1.42
Rif1Q6PR54 Gm16284-201ENSMUST00000140995 400 ntBASIC6.15□□□□□ -1.42
Rif1Q6PR54 Gm25363-201ENSMUST00000158850 245 ntBASIC6.15□□□□□ -1.42
Rif1Q6PR54 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Rif1Q6PR54 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Rif1Q6PR54 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC6.15□□□□□ -1.42
Rif1Q6PR54 Gm2860-201ENSMUST00000199226 707 ntBASIC6.15□□□□□ -1.42
Rif1Q6PR54 Gm5110-201ENSMUST00000203122 1063 ntBASIC6.15□□□□□ -1.42
Rif1Q6PR54 Gm44192-201ENSMUST00000204195 556 ntBASIC6.15□□□□□ -1.42
Rif1Q6PR54 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Rif1Q6PR54 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Rif1Q6PR54 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Rif1Q6PR54 Gm44883-201ENSMUST00000206063 3258 ntBASIC6.15□□□□□ -1.42
Rif1Q6PR54 Gpbp1-202ENSMUST00000091236 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Rif1Q6PR54 Dsg1a-201ENSMUST00000077146 5686 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Rif1Q6PR54 Gm5120-201ENSMUST00000215231 2414 ntBASIC6.15□□□□□ -1.42
Rif1Q6PR54 Gm42777-201ENSMUST00000196026 3603 ntBASIC6.15□□□□□ -1.42
Rif1Q6PR54 Gm37314-201ENSMUST00000193545 2685 ntBASIC6.15□□□□□ -1.42
Rif1Q6PR54 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC6.15□□□□□ -1.42
Rif1Q6PR54 Apol11b-202ENSMUST00000180949 2261 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Rif1Q6PR54 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Rif1Q6PR54 Gm11548-201ENSMUST00000140203 2199 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Rif1Q6PR54 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
Rif1Q6PR54 Naip1-201ENSMUST00000022142 5464 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Rif1Q6PR54 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC6.15□□□□□ -1.43
Rif1Q6PR54 B3gnt2-201ENSMUST00000055549 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Rif1Q6PR54 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Rif1Q6PR54 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Rif1Q6PR54 Gm15967-201ENSMUST00000120027 1116 ntBASIC6.15□□□□□ -1.43
Rif1Q6PR54 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC6.15□□□□□ -1.43
Rif1Q6PR54 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Rif1Q6PR54 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Rif1Q6PR54 Gm29234-201ENSMUST00000187452 1262 ntBASIC6.15□□□□□ -1.43
Rif1Q6PR54 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC6.15□□□□□ -1.43
Rif1Q6PR54 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Rif1Q6PR54 Gm7554-201ENSMUST00000202282 574 ntBASIC6.15□□□□□ -1.43
Rif1Q6PR54 Gm7769-201ENSMUST00000212900 933 ntBASIC6.15□□□□□ -1.43
Rif1Q6PR54 Gm46369-201ENSMUST00000221577 401 ntBASIC6.15□□□□□ -1.43
Rif1Q6PR54 Itgb2l-202ENSMUST00000113773 2806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Rif1Q6PR54 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Rif1Q6PR54 Chrna5-201ENSMUST00000093844 1877 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Rif1Q6PR54 Vgll1-203ENSMUST00000114746 2151 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Rif1Q6PR54 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Rif1Q6PR54 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Rif1Q6PR54 Gm6502-201ENSMUST00000086050 1533 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Rif1Q6PR54 Gm42907-201ENSMUST00000199793 2148 ntBASIC6.15□□□□□ -1.43
Rif1Q6PR54 Nup98-203ENSMUST00000210682 6694 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Rif1Q6PR54 Sorbs1-212ENSMUST00000225148 2379 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
Rif1Q6PR54 AC136986.2-201ENSMUST00000220880 2944 ntBASIC6.14□□□□□ -1.43
Rif1Q6PR54 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rif1Q6PR54 Gm10623-201ENSMUST00000209081 2639 ntBASIC6.14□□□□□ -1.43
Rif1Q6PR54 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Rif1Q6PR54 Gm18451-201ENSMUST00000196759 1719 ntBASIC6.14□□□□□ -1.43
Rif1Q6PR54 Smyd3-204ENSMUST00000128302 6871 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rif1Q6PR54 Gm45194-202ENSMUST00000207962 1991 ntAPPRIS P5 TSL 5 BASIC6.14□□□□□ -1.43
Rif1Q6PR54 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC6.14□□□□□ -1.43
Rif1Q6PR54 Psma8-201ENSMUST00000040860 1693 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rif1Q6PR54 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rif1Q6PR54 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Rif1Q6PR54 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Rif1Q6PR54 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rif1Q6PR54 Gm11242-201ENSMUST00000120103 2457 ntBASIC6.14□□□□□ -1.43
Rif1Q6PR54 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC6.14□□□□□ -1.43
Rif1Q6PR54 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
Rif1Q6PR54 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Rif1Q6PR54 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Rif1Q6PR54 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rif1Q6PR54 Zfp354a-203ENSMUST00000109119 2078 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Rif1Q6PR54 Gm38244-201ENSMUST00000191737 2586 ntBASIC6.14□□□□□ -1.43
Rif1Q6PR54 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Rif1Q6PR54 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Rif1Q6PR54 Gm11649-201ENSMUST00000118214 375 ntBASIC6.14□□□□□ -1.43
Rif1Q6PR54 Gm12844-201ENSMUST00000119463 582 ntBASIC6.14□□□□□ -1.43
Rif1Q6PR54 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
Rif1Q6PR54 Gm29519-201ENSMUST00000186994 398 ntBASIC6.14□□□□□ -1.43
Rif1Q6PR54 Gm28918-201ENSMUST00000188822 699 ntBASIC6.14□□□□□ -1.43
Rif1Q6PR54 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC6.14□□□□□ -1.43
Rif1Q6PR54 Gm37358-201ENSMUST00000195492 479 ntBASIC6.14□□□□□ -1.43
Rif1Q6PR54 Igkv4-56-201ENSMUST00000198436 349 ntBASIC6.14□□□□□ -1.43
Rif1Q6PR54 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Rif1Q6PR54 Gm5886-202ENSMUST00000203957 522 ntBASIC6.14□□□□□ -1.43
Rif1Q6PR54 Gm45279-201ENSMUST00000210315 391 ntBASIC6.14□□□□□ -1.43
Rif1Q6PR54 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC6.14□□□□□ -1.43
Rif1Q6PR54 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Rif1Q6PR54 AC127242.3-201ENSMUST00000222009 580 ntBASIC6.14□□□□□ -1.43
Rif1Q6PR54 AC165157.1-201ENSMUST00000222981 580 ntBASIC6.14□□□□□ -1.43
Rif1Q6PR54 Mir298-201ENSMUST00000083476 82 ntBASIC6.14□□□□□ -1.43
Rif1Q6PR54 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Rif1Q6PR54 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Rif1Q6PR54 Gm18537-202ENSMUST00000206215 1503 ntBASIC6.14□□□□□ -1.43
Rif1Q6PR54 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC6.14□□□□□ -1.43
Rif1Q6PR54 Zfp74-201ENSMUST00000032797 2040 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Rif1Q6PR54 Tcam1-201ENSMUST00000044462 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rif1Q6PR54 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Rif1Q6PR54 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Rif1Q6PR54 4930562C15Rik-201ENSMUST00000100211 3829 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Rif1Q6PR54 Zfp958-201ENSMUST00000073201 1401 ntTSL 5 BASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms