Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm28145-201ENSMUST00000189742 380 ntBASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Gm28400-201ENSMUST00000191332 380 ntBASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Gm37270-201ENSMUST00000194277 330 ntBASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Gm43590-201ENSMUST00000195987 387 ntBASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Gm42938-201ENSMUST00000198414 1072 ntBASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Gm21040-201ENSMUST00000199493 1132 ntBASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Gm7542-201ENSMUST00000201140 777 ntBASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Gm8921-201ENSMUST00000204306 649 ntBASIC7.49□□□□□ -1.21
Trim43aQ3TL54 5930435M05Rik-202ENSMUST00000207936 414 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Gm45394-201ENSMUST00000209240 1175 ntBASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Gm8168-201ENSMUST00000209631 948 ntBASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Mplkip-202ENSMUST00000221480 582 ntTSL 5 BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Gm36758-201ENSMUST00000222594 310 ntBASIC7.49□□□□□ -1.21
Trim43aQ3TL54 AC163660.1-201ENSMUST00000223696 818 ntBASIC7.49□□□□□ -1.21
Trim43aQ3TL54 AC238940.2-201ENSMUST00000224202 330 ntBASIC7.49□□□□□ -1.21
Trim43aQ3TL54 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Mrpl42-201ENSMUST00000075829 666 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Gm44769-201ENSMUST00000206120 2809 ntBASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Gm2108-201ENSMUST00000165058 2177 ntBASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Gm37423-201ENSMUST00000194246 3342 ntBASIC7.49□□□□□ -1.21
Trim43aQ3TL54 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Gm43395-201ENSMUST00000198717 2240 ntBASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Gm45290-201ENSMUST00000211177 3890 ntBASIC7.48□□□□□ -1.21
Trim43aQ3TL54 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Gm43707-201ENSMUST00000196451 3187 ntBASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Gm13878-201ENSMUST00000117986 577 ntBASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Gm11810-201ENSMUST00000118311 333 ntBASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Gm11383-201ENSMUST00000121346 807 ntBASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Gm15644-201ENSMUST00000121764 387 ntBASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Gm5809-201ENSMUST00000121854 529 ntBASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Mir1907-201ENSMUST00000122509 90 ntBASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Gm10913-201ENSMUST00000133732 463 ntBASIC7.48□□□□□ -1.21
Trim43aQ3TL54 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Gm24647-201ENSMUST00000157112 113 ntBASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Gm3326-201ENSMUST00000164656 1043 ntBASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Gm3121-201ENSMUST00000187086 406 ntBASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trim43aQ3TL54 0610006L08Rik-202ENSMUST00000206672 803 ntTSL 3 BASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Gm8077-201ENSMUST00000209221 1024 ntBASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Gm7151-201ENSMUST00000211511 954 ntBASIC7.48□□□□□ -1.21
Trim43aQ3TL54 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Snora9-201ENSMUST00000082579 133 ntBASIC7.48□□□□□ -1.21
Trim43aQ3TL54 B230118H07Rik-201ENSMUST00000090513 969 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Gm37142-201ENSMUST00000193718 3110 ntBASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
Trim43aQ3TL54 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim43aQ3TL54 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Trim43aQ3TL54 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Trim43aQ3TL54 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Trim43aQ3TL54 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC7.47□□□□□ -1.21
Trim43aQ3TL54 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC7.47□□□□□ -1.21
Trim43aQ3TL54 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Trim43aQ3TL54 Amy2b-201ENSMUST00000120184 1577 ntBASIC7.47□□□□□ -1.21
Trim43aQ3TL54 Olfr1441-202ENSMUST00000214153 2078 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Trim43aQ3TL54 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Trim43aQ3TL54 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Trim43aQ3TL54 Slc17a3-202ENSMUST00000091698 1759 ntTSL 5 BASIC7.47□□□□□ -1.21
Trim43aQ3TL54 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Trim43aQ3TL54 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms