Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm13196-201ENSMUST00000118297 379 ntBASIC6.2□□□□□ -1.42
Nkx3-1P97436 Gm11889-201ENSMUST00000118402 1079 ntBASIC6.2□□□□□ -1.42
Nkx3-1P97436 Gm14727-201ENSMUST00000118526 525 ntBASIC6.2□□□□□ -1.42
Nkx3-1P97436 Gm14863-201ENSMUST00000119648 307 ntBASIC6.2□□□□□ -1.42
Nkx3-1P97436 Gm14721-201ENSMUST00000121381 525 ntBASIC6.2□□□□□ -1.42
Nkx3-1P97436 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC6.2□□□□□ -1.42
Nkx3-1P97436 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC6.2□□□□□ -1.42
Nkx3-1P97436 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Nkx3-1P97436 Gm12504-202ENSMUST00000148026 306 ntBASIC6.2□□□□□ -1.42
Nkx3-1P97436 Gm24057-201ENSMUST00000158616 302 ntBASIC6.2□□□□□ -1.42
Nkx3-1P97436 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC6.2□□□□□ -1.42
Nkx3-1P97436 Gm17212-201ENSMUST00000166666 259 ntBASIC6.2□□□□□ -1.42
Nkx3-1P97436 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC6.2□□□□□ -1.42
Nkx3-1P97436 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC6.2□□□□□ -1.42
Nkx3-1P97436 Gm27360-201ENSMUST00000183487 80 ntBASIC6.2□□□□□ -1.42
Nkx3-1P97436 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC6.2□□□□□ -1.42
Nkx3-1P97436 Gm29156-201ENSMUST00000187764 499 ntBASIC6.2□□□□□ -1.42
Nkx3-1P97436 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC6.2□□□□□ -1.42
Nkx3-1P97436 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Nkx3-1P97436 Gm38254-201ENSMUST00000192276 1009 ntBASIC6.2□□□□□ -1.42
Nkx3-1P97436 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC6.2□□□□□ -1.42
Nkx3-1P97436 Gm24826-202ENSMUST00000197298 216 ntBASIC6.2□□□□□ -1.42
Nkx3-1P97436 Gm8924-201ENSMUST00000197405 1132 ntBASIC6.2□□□□□ -1.42
Nkx3-1P97436 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC6.2□□□□□ -1.42
Nkx3-1P97436 Gm21040-201ENSMUST00000199493 1132 ntBASIC6.2□□□□□ -1.42
Nkx3-1P97436 AC099934.1-201ENSMUST00000200493 79 ntBASIC6.2□□□□□ -1.42
Nkx3-1P97436 Gm43905-201ENSMUST00000204516 204 ntBASIC6.2□□□□□ -1.42
Nkx3-1P97436 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Nkx3-1P97436 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC6.2□□□□□ -1.42
Nkx3-1P97436 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nkx3-1P97436 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC6.2□□□□□ -1.42
Nkx3-1P97436 Gm7368-201ENSMUST00000213307 367 ntBASIC6.2□□□□□ -1.42
Nkx3-1P97436 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC6.2□□□□□ -1.42
Nkx3-1P97436 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC6.2□□□□□ -1.42
Nkx3-1P97436 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC6.2□□□□□ -1.42
Nkx3-1P97436 AC155270.1-202ENSMUST00000221503 352 ntBASIC6.2□□□□□ -1.42
Nkx3-1P97436 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC6.2□□□□□ -1.42
Nkx3-1P97436 AV026068-219ENSMUST00000224148 933 ntBASIC6.2□□□□□ -1.42
Nkx3-1P97436 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nkx3-1P97436 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nkx3-1P97436 Gm24036-201ENSMUST00000082868 156 ntBASIC6.2□□□□□ -1.42
Nkx3-1P97436 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Nkx3-1P97436 Gm43606-201ENSMUST00000195938 3556 ntBASIC6.2□□□□□ -1.42
Nkx3-1P97436 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Nkx3-1P97436 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC6.2□□□□□ -1.42
Nkx3-1P97436 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Nkx3-1P97436 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC6.2□□□□□ -1.42
Nkx3-1P97436 Bbs12-202ENSMUST00000108121 2348 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Nkx3-1P97436 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nkx3-1P97436 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
Nkx3-1P97436 Gm15091-201ENSMUST00000112740 2026 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Nkx3-1P97436 Gm15109-201ENSMUST00000133085 2026 ntBASIC6.2□□□□□ -1.42
Nkx3-1P97436 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nkx3-1P97436 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nkx3-1P97436 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nkx3-1P97436 AC159264.1-202ENSMUST00000224856 3162 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Nkx3-1P97436 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm43534-201ENSMUST00000197685 2853 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm9144-201ENSMUST00000101625 1008 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm6181-201ENSMUST00000117187 264 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm14353-201ENSMUST00000122200 869 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm16284-201ENSMUST00000140995 400 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm22262-201ENSMUST00000158713 86 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm6428-201ENSMUST00000161062 345 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm17149-201ENSMUST00000164712 375 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Nkx3-1P97436 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm8609-201ENSMUST00000182967 998 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm29048-201ENSMUST00000185342 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm29403-201ENSMUST00000185491 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm28234-201ENSMUST00000185657 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm28248-201ENSMUST00000186093 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm29633-202ENSMUST00000186217 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm28829-201ENSMUST00000186231 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm28261-201ENSMUST00000186417 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm28983-201ENSMUST00000186685 614 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm28815-201ENSMUST00000186751 615 ntBASIC6.19□□□□□ -1.42
Nkx3-1P97436 Gm28608-201ENSMUST00000186860 615 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms