Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Sox3P53784 Gm12955-201ENSMUST00000119689 957 ntBASIC6.87□□□□□ -1.31
Sox3P53784 Gm13680-201ENSMUST00000119790 793 ntBASIC6.87□□□□□ -1.31
Sox3P53784 Gm11338-201ENSMUST00000120086 1160 ntBASIC6.87□□□□□ -1.31
Sox3P53784 Gm12369-201ENSMUST00000121343 942 ntBASIC6.87□□□□□ -1.31
Sox3P53784 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC6.87□□□□□ -1.31
Sox3P53784 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sox3P53784 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sox3P53784 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC6.87□□□□□ -1.31
Sox3P53784 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sox3P53784 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sox3P53784 Gm16138-201ENSMUST00000159341 821 ntBASIC6.87□□□□□ -1.31
Sox3P53784 Gm4202-201ENSMUST00000169025 733 ntBASIC6.87□□□□□ -1.31
Sox3P53784 Gm24824-201ENSMUST00000175097 78 ntBASIC6.87□□□□□ -1.31
Sox3P53784 Gm23187-201ENSMUST00000175746 86 ntBASIC6.87□□□□□ -1.31
Sox3P53784 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC6.87□□□□□ -1.31
Sox3P53784 Gm6931-201ENSMUST00000183103 371 ntBASIC6.87□□□□□ -1.31
Sox3P53784 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sox3P53784 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC6.87□□□□□ -1.31
Sox3P53784 Gm19035-202ENSMUST00000194575 959 ntBASIC6.87□□□□□ -1.31
Sox3P53784 Gm19211-201ENSMUST00000200251 1206 ntBASIC6.87□□□□□ -1.31
Sox3P53784 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sox3P53784 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Sox3P53784 Gm44571-201ENSMUST00000208092 533 ntBASIC6.87□□□□□ -1.31
Sox3P53784 Gm45506-201ENSMUST00000211620 280 ntBASIC6.87□□□□□ -1.31
Sox3P53784 AC127224.1-201ENSMUST00000218094 453 ntBASIC6.87□□□□□ -1.31
Sox3P53784 Gm5791-201ENSMUST00000220840 489 ntBASIC6.87□□□□□ -1.31
Sox3P53784 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC6.87□□□□□ -1.31
Sox3P53784 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Sox3P53784 Gm29486-201ENSMUST00000088648 372 ntBASIC6.87□□□□□ -1.31
Sox3P53784 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox3P53784 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC6.87□□□□□ -1.31
Sox3P53784 AC124414.1-201ENSMUST00000218033 2946 ntBASIC6.87□□□□□ -1.31
Sox3P53784 Gm44228-201ENSMUST00000204888 2026 ntBASIC6.87□□□□□ -1.31
Sox3P53784 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox3P53784 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sox3P53784 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox3P53784 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox3P53784 Senp6-203ENSMUST00000165607 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox3P53784 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox3P53784 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox3P53784 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox3P53784 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox3P53784 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox3P53784 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC6.87□□□□□ -1.31
Sox3P53784 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Sox3P53784 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox3P53784 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox3P53784 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Sox3P53784 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox3P53784 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Sox3P53784 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox3P53784 Il15ra-217ENSMUST00000148748 1542 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Sox3P53784 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC6.86□□□□□ -1.31
Sox3P53784 Gm5361-201ENSMUST00000211041 1498 ntBASIC6.86□□□□□ -1.31
Sox3P53784 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox3P53784 Gm38099-201ENSMUST00000193280 3170 ntBASIC6.86□□□□□ -1.31
Sox3P53784 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox3P53784 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Sox3P53784 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Sox3P53784 AC124421.1-201ENSMUST00000219114 4154 ntBASIC6.86□□□□□ -1.31
Sox3P53784 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Sox3P53784 Dppa2-201ENSMUST00000097175 1948 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox3P53784 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox3P53784 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Sox3P53784 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox3P53784 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox3P53784 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Sox3P53784 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC6.86□□□□□ -1.31
Sox3P53784 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Sox3P53784 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Sox3P53784 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Sox3P53784 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
Sox3P53784 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
Sox3P53784 Uqcrq-202ENSMUST00000109019 504 ntTSL 2 BASIC6.86□□□□□ -1.31
Sox3P53784 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC6.86□□□□□ -1.31
Sox3P53784 Gm15047-201ENSMUST00000118891 454 ntBASIC6.86□□□□□ -1.31
Sox3P53784 Gm6987-201ENSMUST00000119319 428 ntBASIC6.86□□□□□ -1.31
Sox3P53784 Gm13486-201ENSMUST00000119910 282 ntBASIC6.86□□□□□ -1.31
Sox3P53784 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC6.86□□□□□ -1.31
Sox3P53784 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC6.86□□□□□ -1.31
Sox3P53784 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC6.86□□□□□ -1.31
Sox3P53784 Gm22518-201ENSMUST00000158267 68 ntBASIC6.86□□□□□ -1.31
Sox3P53784 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC6.86□□□□□ -1.31
Sox3P53784 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC6.86□□□□□ -1.31
Sox3P53784 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Sox3P53784 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC6.86□□□□□ -1.31
Sox3P53784 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC6.86□□□□□ -1.31
Sox3P53784 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC6.86□□□□□ -1.31
Sox3P53784 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC6.86□□□□□ -1.31
Sox3P53784 Gm19087-201ENSMUST00000191430 946 ntBASIC6.86□□□□□ -1.31
Sox3P53784 4933403L11Rik-201ENSMUST00000193857 1121 ntBASIC6.86□□□□□ -1.31
Sox3P53784 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC6.86□□□□□ -1.31
Sox3P53784 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Sox3P53784 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC6.86□□□□□ -1.31
Sox3P53784 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Sox3P53784 Gm20223-201ENSMUST00000199932 805 ntBASIC6.86□□□□□ -1.31
Sox3P53784 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC6.86□□□□□ -1.31
Sox3P53784 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Sox3P53784 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC6.86□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms