Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Shmt1P50431 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Shmt1P50431 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Shmt1P50431 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Shmt1P50431 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC7.62□□□□□ -1.19
Shmt1P50431 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Shmt1P50431 Gm44777-201ENSMUST00000205941 4052 ntBASIC7.62□□□□□ -1.19
Shmt1P50431 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Shmt1P50431 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Shmt1P50431 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
Shmt1P50431 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Shmt1P50431 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC7.62□□□□□ -1.19
Shmt1P50431 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC7.62□□□□□ -1.19
Shmt1P50431 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Shmt1P50431 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Shmt1P50431 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC7.61□□□□□ -1.19
Shmt1P50431 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC7.61□□□□□ -1.19
Shmt1P50431 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Shmt1P50431 9330158H04Rik-206ENSMUST00000161161 3103 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Shmt1P50431 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Shmt1P50431 Gm44289-201ENSMUST00000204144 1390 ntBASIC7.61□□□□□ -1.19
Shmt1P50431 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Shmt1P50431 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Shmt1P50431 Gprasp2-201ENSMUST00000113136 3736 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Shmt1P50431 Gm43775-201ENSMUST00000201019 3395 ntBASIC7.61□□□□□ -1.19
Shmt1P50431 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Shmt1P50431 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Shmt1P50431 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
Shmt1P50431 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Shmt1P50431 Gm22781-201ENSMUST00000104083 137 ntBASIC7.61□□□□□ -1.19
Shmt1P50431 Gm8812-201ENSMUST00000118496 412 ntBASIC7.61□□□□□ -1.19
Shmt1P50431 Gm11903-201ENSMUST00000118958 727 ntBASIC7.61□□□□□ -1.19
Shmt1P50431 Gm11689-201ENSMUST00000120766 302 ntBASIC7.61□□□□□ -1.19
Shmt1P50431 Gm11257-201ENSMUST00000121313 315 ntBASIC7.61□□□□□ -1.19
Shmt1P50431 Gm12920-201ENSMUST00000121818 1186 ntBASIC7.61□□□□□ -1.19
Shmt1P50431 Gm25318-201ENSMUST00000122554 314 ntBASIC7.61□□□□□ -1.19
Shmt1P50431 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC7.61□□□□□ -1.19
Shmt1P50431 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Shmt1P50431 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC7.61□□□□□ -1.19
Shmt1P50431 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC7.61□□□□□ -1.19
Shmt1P50431 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC7.61□□□□□ -1.19
Shmt1P50431 Gm24057-201ENSMUST00000158616 302 ntBASIC7.61□□□□□ -1.19
Shmt1P50431 Gm5261-201ENSMUST00000185860 713 ntBASIC7.61□□□□□ -1.19
Shmt1P50431 Gm38373-201ENSMUST00000192042 288 ntBASIC7.61□□□□□ -1.19
Shmt1P50431 Gm19030-201ENSMUST00000194947 552 ntBASIC7.61□□□□□ -1.19
Shmt1P50431 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC7.61□□□□□ -1.19
Shmt1P50431 Gm43656-201ENSMUST00000197882 434 ntBASIC7.61□□□□□ -1.19
Shmt1P50431 Gm44471-201ENSMUST00000197963 100 ntBASIC7.61□□□□□ -1.19
Shmt1P50431 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC7.61□□□□□ -1.19
Shmt1P50431 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Shmt1P50431 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC7.61□□□□□ -1.19
Shmt1P50431 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Shmt1P50431 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Shmt1P50431 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Shmt1P50431 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Shmt1P50431 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Shmt1P50431 Gm8995-202ENSMUST00000208417 3490 ntBASIC7.61□□□□□ -1.19
Shmt1P50431 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Shmt1P50431 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Shmt1P50431 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Shmt1P50431 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Shmt1P50431 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Shmt1P50431 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Shmt1P50431 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC7.61□□□□□ -1.19
Shmt1P50431 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC7.61□□□□□ -1.19
Shmt1P50431 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Shmt1P50431 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
Shmt1P50431 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Shmt1P50431 Gm38244-201ENSMUST00000191737 2586 ntBASIC7.61□□□□□ -1.19
Shmt1P50431 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Shmt1P50431 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Shmt1P50431 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Shmt1P50431 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Shmt1P50431 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Shmt1P50431 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Shmt1P50431 Gm37082-201ENSMUST00000192629 1927 ntBASIC7.6□□□□□ -1.19
Shmt1P50431 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Shmt1P50431 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Shmt1P50431 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC7.6□□□□□ -1.19
Shmt1P50431 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Shmt1P50431 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC7.6□□□□□ -1.19
Shmt1P50431 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Shmt1P50431 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Shmt1P50431 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC7.6□□□□□ -1.19
Shmt1P50431 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Shmt1P50431 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Shmt1P50431 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Shmt1P50431 Gm13940-201ENSMUST00000121023 301 ntBASIC7.6□□□□□ -1.19
Shmt1P50431 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC7.6□□□□□ -1.19
Shmt1P50431 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC7.6□□□□□ -1.19
Shmt1P50431 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC7.6□□□□□ -1.19
Shmt1P50431 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Shmt1P50431 Gm26323-201ENSMUST00000157743 175 ntBASIC7.6□□□□□ -1.19
Shmt1P50431 Gm22730-201ENSMUST00000158085 171 ntBASIC7.6□□□□□ -1.19
Shmt1P50431 Gm16297-201ENSMUST00000161466 459 ntBASIC7.6□□□□□ -1.19
Shmt1P50431 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Shmt1P50431 n-R5s93-201ENSMUST00000180091 119 ntBASIC7.6□□□□□ -1.19
Shmt1P50431 Gm27018-201ENSMUST00000181136 225 ntBASIC7.6□□□□□ -1.19
Shmt1P50431 Mir378d-201ENSMUST00000184232 110 ntBASIC7.6□□□□□ -1.19
Shmt1P50431 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 105.2 ms