Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 AC160340.1-201ENSMUST00000222952 3964 ntBASIC8.34□□□□□ -1.07
Hoxd8P23463 Gm37407-201ENSMUST00000194793 1316 ntBASIC8.34□□□□□ -1.07
Hoxd8P23463 AC120163.1-201ENSMUST00000228618 1680 ntBASIC8.34□□□□□ -1.07
Hoxd8P23463 Ciao1-201ENSMUST00000003759 3075 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Hoxd8P23463 Parpbp-201ENSMUST00000048518 3594 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Hoxd8P23463 Thbs1-201ENSMUST00000039559 5848 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Hoxd8P23463 L3mbtl3-201ENSMUST00000040219 4572 ntAPPRIS P3 TSL 5 BASIC8.34□□□□□ -1.07
Hoxd8P23463 Kbtbd3-202ENSMUST00000212221 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Hoxd8P23463 Cks1brt-201ENSMUST00000076896 2301 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Hoxd8P23463 Prkar1a-203ENSMUST00000106677 3513 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Hoxd8P23463 Csnk1g1-204ENSMUST00000130798 1648 ntTSL 5 BASIC8.34□□□□□ -1.07
Hoxd8P23463 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Hoxd8P23463 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Hoxd8P23463 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Hoxd8P23463 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Hoxd8P23463 Rpl35a-202ENSMUST00000115075 518 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Hoxd8P23463 Gm22195-201ENSMUST00000116861 108 ntBASIC8.34□□□□□ -1.07
Hoxd8P23463 Gm13751-201ENSMUST00000120280 752 ntBASIC8.34□□□□□ -1.07
Hoxd8P23463 Gm15116-201ENSMUST00000122248 663 ntBASIC8.34□□□□□ -1.07
Hoxd8P23463 Gm13724-201ENSMUST00000122395 1155 ntBASIC8.34□□□□□ -1.07
Hoxd8P23463 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC8.34□□□□□ -1.07
Hoxd8P23463 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Hoxd8P23463 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Hoxd8P23463 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Hoxd8P23463 Gm22948-201ENSMUST00000158561 243 ntBASIC8.34□□□□□ -1.07
Hoxd8P23463 U2af1l4-204ENSMUST00000163464 651 ntTSL 5 BASIC8.34□□□□□ -1.07
Hoxd8P23463 Gm18354-201ENSMUST00000173515 1068 ntBASIC8.34□□□□□ -1.07
Hoxd8P23463 Gm19560-201ENSMUST00000177510 514 ntBASIC8.34□□□□□ -1.07
Hoxd8P23463 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC8.34□□□□□ -1.07
Hoxd8P23463 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC8.34□□□□□ -1.07
Hoxd8P23463 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC8.34□□□□□ -1.07
Hoxd8P23463 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC8.34□□□□□ -1.07
Hoxd8P23463 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Hoxd8P23463 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC8.34□□□□□ -1.07
Hoxd8P23463 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC8.34□□□□□ -1.07
Hoxd8P23463 Gm21758-201ENSMUST00000179336 819 ntBASIC8.34□□□□□ -1.07
Hoxd8P23463 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Hoxd8P23463 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC8.34□□□□□ -1.07
Hoxd8P23463 Mir6357-201ENSMUST00000184246 104 ntBASIC8.34□□□□□ -1.07
Hoxd8P23463 Gm29647-201ENSMUST00000188795 666 ntBASIC8.34□□□□□ -1.07
Hoxd8P23463 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC8.34□□□□□ -1.07
Hoxd8P23463 Gm28504-201ENSMUST00000190977 666 ntBASIC8.34□□□□□ -1.07
Hoxd8P23463 Gm20871-201ENSMUST00000191322 931 ntBASIC8.34□□□□□ -1.07
Hoxd8P23463 Gm31511-201ENSMUST00000193134 657 ntBASIC8.34□□□□□ -1.07
Hoxd8P23463 Gm35843-201ENSMUST00000193716 666 ntBASIC8.34□□□□□ -1.07
Hoxd8P23463 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Hoxd8P23463 Gm34015-201ENSMUST00000194908 451 ntBASIC8.34□□□□□ -1.07
Hoxd8P23463 Gm43590-201ENSMUST00000195987 387 ntBASIC8.34□□□□□ -1.07
Hoxd8P23463 Gm6639-201ENSMUST00000196349 429 ntTSL 3 BASIC8.34□□□□□ -1.07
Hoxd8P23463 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC8.34□□□□□ -1.07
Hoxd8P23463 Gm18484-201ENSMUST00000204389 991 ntBASIC8.34□□□□□ -1.07
Hoxd8P23463 Gm44764-202ENSMUST00000204912 671 ntTSL 3 BASIC8.34□□□□□ -1.07
Hoxd8P23463 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC8.34□□□□□ -1.07
Hoxd8P23463 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC8.34□□□□□ -1.07
Hoxd8P23463 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC8.34□□□□□ -1.07
Hoxd8P23463 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Hoxd8P23463 Il17f-201ENSMUST00000039046 1178 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Hoxd8P23463 Olfr1494-201ENSMUST00000051768 948 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Hoxd8P23463 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Hoxd8P23463 Olfr609-201ENSMUST00000055787 965 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Hoxd8P23463 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC8.34□□□□□ -1.07
Hoxd8P23463 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Hoxd8P23463 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC8.34□□□□□ -1.07
Hoxd8P23463 Olfr676-201ENSMUST00000098162 954 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Hoxd8P23463 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Hoxd8P23463 Olfr1284-201ENSMUST00000062407 1774 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Hoxd8P23463 Gm44280-201ENSMUST00000204498 3111 ntBASIC8.34□□□□□ -1.07
Hoxd8P23463 Rnf165-201ENSMUST00000026494 7300 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Hoxd8P23463 Card11-201ENSMUST00000085786 4107 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Hoxd8P23463 Sept2-213ENSMUST00000168776 3267 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Hoxd8P23463 Rims2-205ENSMUST00000227243 4760 ntAPPRIS ALT2 BASIC8.34□□□□□ -1.07
Hoxd8P23463 Vmn2r92-201ENSMUST00000169686 2583 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Hoxd8P23463 Gm20110-201ENSMUST00000218263 2095 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Hoxd8P23463 Cul2-201ENSMUST00000025073 3727 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Hoxd8P23463 Cav1-202ENSMUST00000115453 2746 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Hoxd8P23463 Sf3b1-201ENSMUST00000027127 6195 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Hoxd8P23463 Rel-201ENSMUST00000102864 7466 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Hoxd8P23463 Cfap161-202ENSMUST00000119134 2868 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Hoxd8P23463 Acly-207ENSMUST00000165111 4162 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Hoxd8P23463 Asns-201ENSMUST00000031766 2001 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Hoxd8P23463 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC8.34□□□□□ -1.08
Hoxd8P23463 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Hoxd8P23463 Ctnnd1-218ENSMUST00000111692 6170 ntAPPRIS ALT1 TSL 5 BASIC8.34□□□□□ -1.08
Hoxd8P23463 Clasp1-214ENSMUST00000189570 5502 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.08
Hoxd8P23463 Gm14540-201ENSMUST00000138298 3261 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
Hoxd8P23463 Ablim3-202ENSMUST00000166783 4213 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Hoxd8P23463 Wipf3-206ENSMUST00000172046 4204 ntAPPRIS P4 TSL 5 BASIC8.34□□□□□ -1.08
Hoxd8P23463 Zfat-202ENSMUST00000160248 3866 ntAPPRIS P4 TSL 1 (best) BASIC8.33□□□□□ -1.08
Hoxd8P23463 Aldh2-201ENSMUST00000031411 3867 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Hoxd8P23463 Cacnb2-214ENSMUST00000193800 2117 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Hoxd8P23463 Kdm5a-201ENSMUST00000005108 10944 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Hoxd8P23463 Cwc22-204ENSMUST00000111821 3388 ntAPPRIS P3 TSL 5 BASIC8.33□□□□□ -1.08
Hoxd8P23463 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC8.33□□□□□ -1.08
Hoxd8P23463 Tgfb3-201ENSMUST00000003687 3383 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Hoxd8P23463 Olfr522-201ENSMUST00000050585 4766 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Hoxd8P23463 A830010M20Rik-201ENSMUST00000060553 2439 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Hoxd8P23463 B130021K23Rik-201ENSMUST00000205226 2593 ntBASIC8.33□□□□□ -1.08
Hoxd8P23463 Gm4927-201ENSMUST00000219548 1318 ntBASIC8.33□□□□□ -1.08
Hoxd8P23463 AC159188.2-201ENSMUST00000224103 1301 ntBASIC8.33□□□□□ -1.08
Hoxd8P23463 Slc2a9-210ENSMUST00000155634 3164 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms