Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Pogk-201ENSMUST00000127596 769 ntTSL 3 BASIC5.65□□□□□ -1.5
Sdc1P18828 Gm12121-201ENSMUST00000131630 500 ntTSL 3 BASIC5.65□□□□□ -1.5
Sdc1P18828 Gm2709-201ENSMUST00000142979 350 ntBASIC5.65□□□□□ -1.5
Sdc1P18828 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC5.65□□□□□ -1.5
Sdc1P18828 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC5.65□□□□□ -1.5
Sdc1P18828 Gm25962-201ENSMUST00000157173 168 ntBASIC5.65□□□□□ -1.5
Sdc1P18828 Gm24530-201ENSMUST00000157948 288 ntBASIC5.65□□□□□ -1.5
Sdc1P18828 Gm23891-201ENSMUST00000158114 138 ntBASIC5.65□□□□□ -1.5
Sdc1P18828 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sdc1P18828 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sdc1P18828 Gm26269-201ENSMUST00000180144 126 ntBASIC5.65□□□□□ -1.5
Sdc1P18828 Gm26875-201ENSMUST00000181006 950 ntBASIC5.65□□□□□ -1.5
Sdc1P18828 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sdc1P18828 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC5.65□□□□□ -1.5
Sdc1P18828 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Sdc1P18828 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sdc1P18828 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sdc1P18828 Scgb2b30-201ENSMUST00000187013 336 ntBASIC5.65□□□□□ -1.5
Sdc1P18828 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sdc1P18828 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sdc1P18828 Gm21728-201ENSMUST00000188442 695 ntBASIC5.65□□□□□ -1.5
Sdc1P18828 Gm21889-201ENSMUST00000188487 695 ntBASIC5.65□□□□□ -1.5
Sdc1P18828 Gm5251-201ENSMUST00000188959 472 ntBASIC5.65□□□□□ -1.5
Sdc1P18828 Gm20932-201ENSMUST00000189115 694 ntBASIC5.65□□□□□ -1.5
Sdc1P18828 Gm8510-201ENSMUST00000189202 895 ntBASIC5.65□□□□□ -1.5
Sdc1P18828 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
Sdc1P18828 Olfr1392-201ENSMUST00000189851 1018 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Sdc1P18828 Gm21920-201ENSMUST00000190042 695 ntBASIC5.65□□□□□ -1.5
Sdc1P18828 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sdc1P18828 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Sdc1P18828 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sdc1P18828 Scgb2b10-201ENSMUST00000191403 318 ntBASIC5.65□□□□□ -1.5
Sdc1P18828 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC5.65□□□□□ -1.5
Sdc1P18828 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sdc1P18828 Gm42580-201ENSMUST00000197223 753 ntBASIC5.65□□□□□ -1.5
Sdc1P18828 Gm8921-201ENSMUST00000204306 649 ntBASIC5.65□□□□□ -1.5
Sdc1P18828 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Sdc1P18828 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Sdc1P18828 Gm45672-201ENSMUST00000209700 768 ntTSL 3 BASIC5.65□□□□□ -1.5
Sdc1P18828 Gm45514-201ENSMUST00000211531 689 ntBASIC5.65□□□□□ -1.5
Sdc1P18828 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC5.65□□□□□ -1.5
Sdc1P18828 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC5.65□□□□□ -1.5
Sdc1P18828 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC5.65□□□□□ -1.5
Sdc1P18828 AC165260.2-202ENSMUST00000224998 631 ntBASIC5.65□□□□□ -1.5
Sdc1P18828 AC125117.2-201ENSMUST00000228344 1140 ntBASIC5.65□□□□□ -1.5
Sdc1P18828 AC154806.5-205ENSMUST00000228828 411 ntBASIC5.65□□□□□ -1.5
Sdc1P18828 Gm7086-202ENSMUST00000228849 506 ntBASIC5.65□□□□□ -1.5
Sdc1P18828 Thyn1-201ENSMUST00000039161 918 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sdc1P18828 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Sdc1P18828 Gm6807-201ENSMUST00000077435 888 ntBASIC5.65□□□□□ -1.5
Sdc1P18828 Gm4956-201ENSMUST00000082032 1148 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Sdc1P18828 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sdc1P18828 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Sdc1P18828 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Sdc1P18828 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Sdc1P18828 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Sdc1P18828 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
Sdc1P18828 Gm37435-201ENSMUST00000192078 3947 ntBASIC5.65□□□□□ -1.51
Sdc1P18828 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
Sdc1P18828 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Sdc1P18828 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Sdc1P18828 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Sdc1P18828 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Sdc1P18828 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Sdc1P18828 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC5.65□□□□□ -1.51
Sdc1P18828 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
Sdc1P18828 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
Sdc1P18828 Gm9585-201ENSMUST00000219681 1404 ntBASIC5.65□□□□□ -1.51
Sdc1P18828 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Sdc1P18828 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Sdc1P18828 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC5.64□□□□□ -1.51
Sdc1P18828 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Sdc1P18828 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sdc1P18828 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC5.64□□□□□ -1.51
Sdc1P18828 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sdc1P18828 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
Sdc1P18828 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Sdc1P18828 Gm9314-201ENSMUST00000199881 1528 ntBASIC5.64□□□□□ -1.51
Sdc1P18828 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sdc1P18828 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
Sdc1P18828 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sdc1P18828 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC5.64□□□□□ -1.51
Sdc1P18828 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sdc1P18828 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sdc1P18828 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC5.64□□□□□ -1.51
Sdc1P18828 Gm46199-201ENSMUST00000220373 1693 ntBASIC5.64□□□□□ -1.51
Sdc1P18828 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Sdc1P18828 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Sdc1P18828 Mir708-201ENSMUST00000102189 109 ntBASIC5.64□□□□□ -1.51
Sdc1P18828 Gm25095-201ENSMUST00000104047 131 ntBASIC5.64□□□□□ -1.51
Sdc1P18828 Gm13878-201ENSMUST00000117986 577 ntBASIC5.64□□□□□ -1.51
Sdc1P18828 Gm12654-201ENSMUST00000120387 587 ntBASIC5.64□□□□□ -1.51
Sdc1P18828 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC5.64□□□□□ -1.51
Sdc1P18828 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC5.64□□□□□ -1.51
Sdc1P18828 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC5.64□□□□□ -1.51
Sdc1P18828 Bnip1-206ENSMUST00000135824 629 ntTSL 5 BASIC5.64□□□□□ -1.51
Sdc1P18828 Nhej1-201ENSMUST00000152855 1053 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sdc1P18828 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC5.64□□□□□ -1.51
Sdc1P18828 Gm24347-201ENSMUST00000158711 142 ntBASIC5.64□□□□□ -1.51
Sdc1P18828 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms