Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Ms4a13-201ENSMUST00000073380 1375 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdx1P18111 Gm37140-201ENSMUST00000192914 1684 ntBASIC5.82□□□□□ -1.48
Cdx1P18111 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdx1P18111 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Cdx1P18111 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Cdx1P18111 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdx1P18111 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Cdx1P18111 Gm37913-201ENSMUST00000192925 2544 ntBASIC5.82□□□□□ -1.48
Cdx1P18111 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdx1P18111 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Cdx1P18111 Gm28077-201ENSMUST00000190250 1635 ntTSL 5 BASIC5.82□□□□□ -1.48
Cdx1P18111 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Cdx1P18111 Gm6679-201ENSMUST00000191467 1869 ntBASIC5.82□□□□□ -1.48
Cdx1P18111 Nipsnap3a-202ENSMUST00000107666 1553 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Cdx1P18111 Gm23946-201ENSMUST00000104423 197 ntBASIC5.82□□□□□ -1.48
Cdx1P18111 Tsacc-201ENSMUST00000010682 481 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdx1P18111 Smco3-202ENSMUST00000111894 1069 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdx1P18111 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC5.82□□□□□ -1.48
Cdx1P18111 Gm14749-201ENSMUST00000121269 333 ntBASIC5.82□□□□□ -1.48
Cdx1P18111 Gm12265-201ENSMUST00000139025 468 ntTSL 2 BASIC5.82□□□□□ -1.48
Cdx1P18111 Gm11962-201ENSMUST00000145746 255 ntBASIC5.82□□□□□ -1.48
Cdx1P18111 Gm25372-201ENSMUST00000158161 255 ntBASIC5.82□□□□□ -1.48
Cdx1P18111 Gm16573-203ENSMUST00000162231 807 ntTSL 2 BASIC5.82□□□□□ -1.48
Cdx1P18111 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Cdx1P18111 Lgals1-ps2-201ENSMUST00000170221 519 ntBASIC5.82□□□□□ -1.48
Cdx1P18111 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Cdx1P18111 Gm15251-201ENSMUST00000177947 883 ntBASIC5.82□□□□□ -1.48
Cdx1P18111 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC5.82□□□□□ -1.48
Cdx1P18111 9330159M07Rik-204ENSMUST00000188156 737 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Cdx1P18111 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC5.82□□□□□ -1.48
Cdx1P18111 1700030F04Rik-202ENSMUST00000188781 617 ntTSL 5 BASIC5.82□□□□□ -1.48
Cdx1P18111 Gm44252-201ENSMUST00000204187 330 ntBASIC5.82□□□□□ -1.48
Cdx1P18111 Gm34701-201ENSMUST00000204213 849 ntBASIC5.82□□□□□ -1.48
Cdx1P18111 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Cdx1P18111 Gm45070-201ENSMUST00000208100 246 ntBASIC5.82□□□□□ -1.48
Cdx1P18111 Gm45401-201ENSMUST00000209456 733 ntBASIC5.82□□□□□ -1.48
Cdx1P18111 Gm36849-201ENSMUST00000210345 680 ntTSL 2 BASIC5.82□□□□□ -1.48
Cdx1P18111 Gm3011-201ENSMUST00000215669 582 ntBASIC5.82□□□□□ -1.48
Cdx1P18111 Gm17875-201ENSMUST00000216005 941 ntBASIC5.82□□□□□ -1.48
Cdx1P18111 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Cdx1P18111 Gm18601-201ENSMUST00000220831 634 ntBASIC5.82□□□□□ -1.48
Cdx1P18111 Mplkip-202ENSMUST00000221480 582 ntTSL 5 BASIC5.82□□□□□ -1.48
Cdx1P18111 AL590616.1-201ENSMUST00000223339 574 ntBASIC5.82□□□□□ -1.48
Cdx1P18111 AV026068-220ENSMUST00000224153 1147 ntBASIC5.82□□□□□ -1.48
Cdx1P18111 CT009556.2-201ENSMUST00000227980 1123 ntBASIC5.82□□□□□ -1.48
Cdx1P18111 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdx1P18111 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Cdx1P18111 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Cdx1P18111 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdx1P18111 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Cdx1P18111 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Cdx1P18111 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC5.82□□□□□ -1.48
Cdx1P18111 Gm14912-201ENSMUST00000120166 1773 ntBASIC5.82□□□□□ -1.48
Cdx1P18111 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Cdx1P18111 Dram2-203ENSMUST00000121034 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdx1P18111 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdx1P18111 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdx1P18111 Gm44769-201ENSMUST00000206120 2809 ntBASIC5.82□□□□□ -1.48
Cdx1P18111 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC5.82□□□□□ -1.48
Cdx1P18111 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdx1P18111 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Cdx1P18111 Gm16506-201ENSMUST00000165553 1405 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Cdx1P18111 Slc25a5-ps-203ENSMUST00000223928 1442 ntBASIC5.82□□□□□ -1.48
Cdx1P18111 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC5.82□□□□□ -1.48
Cdx1P18111 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Cdx1P18111 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
Cdx1P18111 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdx1P18111 Gm44675-201ENSMUST00000208188 2927 ntBASIC5.81□□□□□ -1.48
Cdx1P18111 Ldhc-201ENSMUST00000014545 1370 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdx1P18111 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Cdx1P18111 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdx1P18111 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Cdx1P18111 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdx1P18111 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdx1P18111 Gm44850-201ENSMUST00000205621 1329 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Cdx1P18111 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdx1P18111 Sh3kbp1-205ENSMUST00000112453 2515 ntTSL 5 BASIC5.81□□□□□ -1.48
Cdx1P18111 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdx1P18111 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Cdx1P18111 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Cdx1P18111 Gm44229-201ENSMUST00000203211 2487 ntBASIC5.81□□□□□ -1.48
Cdx1P18111 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Cdx1P18111 Gm5681-201ENSMUST00000189217 1533 ntBASIC5.81□□□□□ -1.48
Cdx1P18111 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Cdx1P18111 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdx1P18111 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Cdx1P18111 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Cdx1P18111 Npm1-203ENSMUST00000101375 966 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Cdx1P18111 Gm26146-201ENSMUST00000104478 185 ntBASIC5.81□□□□□ -1.48
Cdx1P18111 Lair1-204ENSMUST00000108600 742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdx1P18111 Churc1-202ENSMUST00000110399 535 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Cdx1P18111 1700015F17Rik-201ENSMUST00000115447 710 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdx1P18111 Gm8688-201ENSMUST00000118240 969 ntBASIC5.81□□□□□ -1.48
Cdx1P18111 Gm14796-201ENSMUST00000121216 959 ntBASIC5.81□□□□□ -1.48
Cdx1P18111 Gm14328-201ENSMUST00000122178 408 ntBASIC5.81□□□□□ -1.48
Cdx1P18111 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Cdx1P18111 Gm5970-201ENSMUST00000131638 1216 ntBASIC5.81□□□□□ -1.48
Cdx1P18111 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC5.81□□□□□ -1.48
Cdx1P18111 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC5.81□□□□□ -1.48
Cdx1P18111 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms