Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm5260-201ENSMUST00000186157 949 ntBASIC8.29□□□□□ -1.08
Col1a1P11087 Gm42580-201ENSMUST00000197223 753 ntBASIC8.29□□□□□ -1.08
Col1a1P11087 Gm7166-201ENSMUST00000199715 303 ntBASIC8.29□□□□□ -1.08
Col1a1P11087 Gm30708-201ENSMUST00000202183 312 ntBASIC8.29□□□□□ -1.08
Col1a1P11087 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC8.29□□□□□ -1.08
Col1a1P11087 Gm44163-201ENSMUST00000205140 475 ntBASIC8.29□□□□□ -1.08
Col1a1P11087 Gm44091-201ENSMUST00000205212 649 ntBASIC8.29□□□□□ -1.08
Col1a1P11087 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC8.29□□□□□ -1.08
Col1a1P11087 Gm6575-201ENSMUST00000222946 697 ntBASIC8.29□□□□□ -1.08
Col1a1P11087 AC138329.1-201ENSMUST00000225040 471 ntBASIC8.29□□□□□ -1.08
Col1a1P11087 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col1a1P11087 Mir135a-1-201ENSMUST00000083473 90 ntBASIC8.29□□□□□ -1.08
Col1a1P11087 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC8.29□□□□□ -1.08
Col1a1P11087 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col1a1P11087 Gm44950-201ENSMUST00000206403 2296 ntBASIC8.29□□□□□ -1.08
Col1a1P11087 Gm43335-201ENSMUST00000198299 3276 ntBASIC8.29□□□□□ -1.08
Col1a1P11087 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Col1a1P11087 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col1a1P11087 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col1a1P11087 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Col1a1P11087 Plekhh1-204ENSMUST00000219956 5229 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col1a1P11087 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col1a1P11087 Gm6249-201ENSMUST00000211142 3314 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Col1a1P11087 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Col1a1P11087 Tenm4-201ENSMUST00000107162 11021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col1a1P11087 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Col1a1P11087 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Col1a1P11087 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col1a1P11087 Siglec1-201ENSMUST00000028794 6387 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col1a1P11087 Katnb1-201ENSMUST00000034239 3777 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col1a1P11087 Ccdc187-202ENSMUST00000217256 9411 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Col1a1P11087 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Col1a1P11087 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Col1a1P11087 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC8.28□□□□□ -1.08
Col1a1P11087 Gm11821-201ENSMUST00000117335 979 ntBASIC8.28□□□□□ -1.08
Col1a1P11087 Gm14018-201ENSMUST00000119042 455 ntBASIC8.28□□□□□ -1.08
Col1a1P11087 Gm15618-201ENSMUST00000121610 452 ntBASIC8.28□□□□□ -1.08
Col1a1P11087 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC8.28□□□□□ -1.08
Col1a1P11087 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Col1a1P11087 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Col1a1P11087 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC8.28□□□□□ -1.08
Col1a1P11087 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC8.28□□□□□ -1.08
Col1a1P11087 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC8.28□□□□□ -1.08
Col1a1P11087 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC8.28□□□□□ -1.08
Col1a1P11087 AC132260.1-201ENSMUST00000225499 734 ntBASIC8.28□□□□□ -1.08
Col1a1P11087 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col1a1P11087 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Col1a1P11087 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Col1a1P11087 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Col1a1P11087 Wdr11-201ENSMUST00000084519 4550 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col1a1P11087 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC8.28□□□□□ -1.08
Col1a1P11087 Myt1-202ENSMUST00000108756 5509 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col1a1P11087 Klhl32-203ENSMUST00000108214 5970 ntTSL 5 BASIC8.28□□□□□ -1.08
Col1a1P11087 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC8.28□□□□□ -1.08
Col1a1P11087 Clasp1-206ENSMUST00000186349 7281 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Col1a1P11087 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Col1a1P11087 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC8.28□□□□□ -1.08
Col1a1P11087 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Col1a1P11087 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Col1a1P11087 Rora-201ENSMUST00000034766 10878 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Col1a1P11087 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Col1a1P11087 Cdh16-204ENSMUST00000211903 2874 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col1a1P11087 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC8.28□□□□□ -1.08
Col1a1P11087 Pum1-204ENSMUST00000105991 4614 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Col1a1P11087 Vmn1r51-203ENSMUST00000226542 4164 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Col1a1P11087 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Col1a1P11087 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col1a1P11087 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col1a1P11087 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
Col1a1P11087 Gm42972-201ENSMUST00000196937 5617 ntBASIC8.27□□□□□ -1.08
Col1a1P11087 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
Col1a1P11087 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.08
Col1a1P11087 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Col1a1P11087 Rassf6-206ENSMUST00000202784 1919 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Col1a1P11087 Gm24069-201ENSMUST00000104512 127 ntBASIC8.27□□□□□ -1.09
Col1a1P11087 n-R5s72-201ENSMUST00000104518 119 ntBASIC8.27□□□□□ -1.09
Col1a1P11087 Zfp661-203ENSMUST00000110368 2981 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Col1a1P11087 Gm24343-201ENSMUST00000158708 111 ntBASIC8.27□□□□□ -1.09
Col1a1P11087 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC8.27□□□□□ -1.09
Col1a1P11087 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC8.27□□□□□ -1.09
Col1a1P11087 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Col1a1P11087 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Col1a1P11087 Gm38237-201ENSMUST00000193366 376 ntBASIC8.27□□□□□ -1.09
Col1a1P11087 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC8.27□□□□□ -1.09
Col1a1P11087 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC8.27□□□□□ -1.09
Col1a1P11087 AC126685.1-201ENSMUST00000221001 121 ntBASIC8.27□□□□□ -1.09
Col1a1P11087 Gm7252-201ENSMUST00000223284 456 ntBASIC8.27□□□□□ -1.09
Col1a1P11087 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Col1a1P11087 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Col1a1P11087 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Col1a1P11087 Gria3-201ENSMUST00000076349 5192 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Col1a1P11087 Gm45182-201ENSMUST00000207579 2404 ntBASIC8.27□□□□□ -1.09
Col1a1P11087 Gm11590-201ENSMUST00000118999 1455 ntBASIC8.27□□□□□ -1.09
Col1a1P11087 5430403N17Rik-201ENSMUST00000210717 2553 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Col1a1P11087 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Col1a1P11087 Muc6-201ENSMUST00000062451 8650 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Col1a1P11087 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Col1a1P11087 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col1a1P11087 Gm15789-201ENSMUST00000118992 1359 ntBASIC8.26□□□□□ -1.09
Col1a1P11087 Gm22370-201ENSMUST00000102422 83 ntBASIC8.26□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms