Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Lrrc8dos-201ENSMUST00000135958 586 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxd3P09027 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxd3P09027 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxd3P09027 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC6.7□□□□□ -1.34
Hoxd3P09027 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxd3P09027 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Hoxd3P09027 Vmn2r-ps31-201ENSMUST00000176474 760 ntBASIC6.7□□□□□ -1.34
Hoxd3P09027 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
Hoxd3P09027 Mir6974-201ENSMUST00000184381 83 ntBASIC6.7□□□□□ -1.34
Hoxd3P09027 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Hoxd3P09027 9330159M07Rik-204ENSMUST00000188156 737 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxd3P09027 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
Hoxd3P09027 Gm37904-201ENSMUST00000195591 312 ntBASIC6.7□□□□□ -1.34
Hoxd3P09027 Gm42997-201ENSMUST00000196074 918 ntTSL 3 BASIC6.7□□□□□ -1.34
Hoxd3P09027 Gm44538-201ENSMUST00000205615 348 ntBASIC6.7□□□□□ -1.34
Hoxd3P09027 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC6.7□□□□□ -1.34
Hoxd3P09027 AC132384.9-201ENSMUST00000218085 277 ntBASIC6.7□□□□□ -1.34
Hoxd3P09027 AC132384.5-201ENSMUST00000218562 226 ntBASIC6.7□□□□□ -1.34
Hoxd3P09027 Gm10264-201ENSMUST00000220589 429 ntBASIC6.7□□□□□ -1.34
Hoxd3P09027 Gm5668-201ENSMUST00000220897 436 ntBASIC6.7□□□□□ -1.34
Hoxd3P09027 Gm7239-201ENSMUST00000220981 860 ntBASIC6.7□□□□□ -1.34
Hoxd3P09027 Gm21941-201ENSMUST00000221121 562 ntBASIC6.7□□□□□ -1.34
Hoxd3P09027 CT033781.3-201ENSMUST00000221886 504 ntTSL 2 BASIC6.7□□□□□ -1.34
Hoxd3P09027 AC100209.1-201ENSMUST00000225562 409 ntBASIC6.7□□□□□ -1.34
Hoxd3P09027 AC123061.2-201ENSMUST00000226234 802 ntBASIC6.7□□□□□ -1.34
Hoxd3P09027 AC124709.1-201ENSMUST00000227296 620 ntBASIC6.7□□□□□ -1.34
Hoxd3P09027 Retnlb-201ENSMUST00000023328 695 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxd3P09027 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Hoxd3P09027 Gm25129-201ENSMUST00000082651 133 ntBASIC6.7□□□□□ -1.34
Hoxd3P09027 Gm25403-201ENSMUST00000082971 143 ntBASIC6.7□□□□□ -1.34
Hoxd3P09027 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxd3P09027 Olfr155-202ENSMUST00000107860 3480 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Hoxd3P09027 Dpf3-207ENSMUST00000178756 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxd3P09027 Gm5361-201ENSMUST00000211041 1498 ntBASIC6.7□□□□□ -1.34
Hoxd3P09027 Ptprb-203ENSMUST00000218553 7016 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Hoxd3P09027 Rnf38-204ENSMUST00000107836 1694 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Hoxd3P09027 Snx32-201ENSMUST00000070172 1650 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxd3P09027 Plekhh1-204ENSMUST00000219956 5229 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxd3P09027 Optn-202ENSMUST00000114996 2614 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxd3P09027 Gm44037-201ENSMUST00000204816 1891 ntBASIC6.7□□□□□ -1.34
Hoxd3P09027 Ick-202ENSMUST00000044551 6560 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxd3P09027 Def8-205ENSMUST00000108832 3242 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Hoxd3P09027 Def8-201ENSMUST00000001522 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxd3P09027 Nln-201ENSMUST00000109315 4162 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxd3P09027 Srcap-206ENSMUST00000186954 9345 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Hoxd3P09027 Gm7364-201ENSMUST00000188760 1501 ntBASIC6.7□□□□□ -1.34
Hoxd3P09027 Akt3-201ENSMUST00000019843 1511 ntTSL 5 BASIC6.7□□□□□ -1.34
Hoxd3P09027 Pkia-201ENSMUST00000028999 3617 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxd3P09027 Tspan9-203ENSMUST00000112173 3819 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxd3P09027 Asic5-202ENSMUST00000107736 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxd3P09027 Rpusd1-201ENSMUST00000047273 1703 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxd3P09027 Thada-201ENSMUST00000047524 7884 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxd3P09027 Pah-201ENSMUST00000020241 2142 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxd3P09027 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Hoxd3P09027 Acsl6-204ENSMUST00000093106 5804 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxd3P09027 AC113125.1-201ENSMUST00000226852 1774 ntBASIC6.69□□□□□ -1.34
Hoxd3P09027 Tsga10-208ENSMUST00000193669 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Hoxd3P09027 Cyp2c55-201ENSMUST00000025966 1995 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Hoxd3P09027 Hmcn2-201ENSMUST00000113532 15646 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Hoxd3P09027 Gm28720-201ENSMUST00000190728 3156 ntBASIC6.69□□□□□ -1.34
Hoxd3P09027 Exoc1-203ENSMUST00000113493 3371 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Hoxd3P09027 Tnfsf8-201ENSMUST00000030047 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Hoxd3P09027 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Hoxd3P09027 Gm5134-201ENSMUST00000099577 2838 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Hoxd3P09027 Scel-202ENSMUST00000227322 2443 ntAPPRIS ALT2 BASIC6.69□□□□□ -1.34
Hoxd3P09027 Ctse-202ENSMUST00000112411 1837 ntTSL 5 BASIC6.69□□□□□ -1.34
Hoxd3P09027 Gm26874-201ENSMUST00000181959 1817 ntTSL 5 BASIC6.69□□□□□ -1.34
Hoxd3P09027 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Hoxd3P09027 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC6.69□□□□□ -1.34
Hoxd3P09027 Grik1-202ENSMUST00000072256 3655 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Hoxd3P09027 Tex11-203ENSMUST00000113718 3278 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Hoxd3P09027 Synj2-208ENSMUST00000115789 5130 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Hoxd3P09027 Pde10a-203ENSMUST00000115708 2471 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Hoxd3P09027 Gm17473-202ENSMUST00000228544 2071 ntBASIC6.69□□□□□ -1.34
Hoxd3P09027 Gm14035-201ENSMUST00000117596 1475 ntBASIC6.69□□□□□ -1.34
Hoxd3P09027 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Hoxd3P09027 L3mbtl2-204ENSMUST00000172748 3368 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Hoxd3P09027 Gm26384-201ENSMUST00000102183 110 ntBASIC6.69□□□□□ -1.34
Hoxd3P09027 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC6.69□□□□□ -1.34
Hoxd3P09027 Gm14188-201ENSMUST00000105060 168 ntBASIC6.69□□□□□ -1.34
Hoxd3P09027 Olfr329-ps-202ENSMUST00000108823 1060 ntAPPRIS P2 BASIC6.69□□□□□ -1.34
Hoxd3P09027 Rhox4d-201ENSMUST00000115175 936 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Hoxd3P09027 Gm5393-201ENSMUST00000119106 272 ntBASIC6.69□□□□□ -1.34
Hoxd3P09027 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC6.69□□□□□ -1.34
Hoxd3P09027 Gm12005-201ENSMUST00000121451 379 ntBASIC6.69□□□□□ -1.34
Hoxd3P09027 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Hoxd3P09027 Gm14813-201ENSMUST00000122291 395 ntBASIC6.69□□□□□ -1.34
Hoxd3P09027 n-R5s43-201ENSMUST00000122739 110 ntBASIC6.69□□□□□ -1.34
Hoxd3P09027 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC6.69□□□□□ -1.34
Hoxd3P09027 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Hoxd3P09027 Gm15339-201ENSMUST00000153577 506 ntTSL 3 BASIC6.69□□□□□ -1.34
Hoxd3P09027 Gm25551-201ENSMUST00000158082 103 ntBASIC6.69□□□□□ -1.34
Hoxd3P09027 Gm24363-201ENSMUST00000158440 311 ntBASIC6.69□□□□□ -1.34
Hoxd3P09027 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC6.69□□□□□ -1.34
Hoxd3P09027 Gm25397-201ENSMUST00000176951 92 ntBASIC6.69□□□□□ -1.34
Hoxd3P09027 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Hoxd3P09027 Gm27043-201ENSMUST00000182807 958 ntBASIC6.69□□□□□ -1.34
Hoxd3P09027 Gm7734-201ENSMUST00000182832 1011 ntBASIC6.69□□□□□ -1.34
Hoxd3P09027 Mir6930-201ENSMUST00000183859 68 ntBASIC6.69□□□□□ -1.34
Hoxd3P09027 Gm5256-201ENSMUST00000191412 877 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 146.3 ms