Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx1-1G3UXB3 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx1-1G3UXB3 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx1-1G3UXB3 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx1-1G3UXB3 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx1-1G3UXB3 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx1-1G3UXB3 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx1-1G3UXB3 AC154300.1-201ENSMUST00000219735 2627 ntTSL 5 BASIC10.48□□□□□ -0.73
Nkx1-1G3UXB3 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx1-1G3UXB3 Sorbs2-228ENSMUST00000153798 2667 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx1-1G3UXB3 Ndufb8-209ENSMUST00000171415 2142 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx1-1G3UXB3 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx1-1G3UXB3 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC10.48□□□□□ -0.73
Nkx1-1G3UXB3 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx1-1G3UXB3 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Wdr20rt-203ENSMUST00000221980 1667 ntTSL 5 BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Sytl3-205ENSMUST00000160483 1720 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Nlrc5-202ENSMUST00000098489 1721 ntTSL 5 BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 AC117656.3-203ENSMUST00000225007 1809 ntBASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Cyp4x1-202ENSMUST00000106545 4187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Ehmt1-202ENSMUST00000091348 4615 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Igkv4-72-201ENSMUST00000103346 402 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Oprm1-217ENSMUST00000105615 1258 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Gm13880-201ENSMUST00000118421 474 ntBASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Gm14428-201ENSMUST00000120408 822 ntBASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Gm12543-201ENSMUST00000120410 543 ntBASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Gm12607-201ENSMUST00000120724 493 ntBASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Gm11403-201ENSMUST00000122195 369 ntBASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Gm14110-201ENSMUST00000127688 758 ntTSL 5 BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 1700003M07Rik-201ENSMUST00000139884 541 ntTSL 2 BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Gm15627-201ENSMUST00000140421 437 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Gm14967-201ENSMUST00000153483 335 ntTSL 5 BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Gm24750-201ENSMUST00000157843 104 ntBASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Gm25920-201ENSMUST00000158307 99 ntBASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Gm15974-201ENSMUST00000159103 531 ntBASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Pkd2l2-202ENSMUST00000166156 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Pdzk1ip1-207ENSMUST00000171877 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Pdzk1ip1-208ENSMUST00000177647 826 ntAPPRIS P3 TSL 3 BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Gm5262-201ENSMUST00000180655 996 ntBASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Mir6356-201ENSMUST00000183541 102 ntBASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Gm4854-201ENSMUST00000185902 574 ntBASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Gm29134-201ENSMUST00000186579 126 ntBASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Gm29491-201ENSMUST00000189481 506 ntTSL 5 BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Gm28241-201ENSMUST00000190916 235 ntBASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Gm42573-201ENSMUST00000202327 478 ntBASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Gm35514-201ENSMUST00000221615 352 ntTSL 5 BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 AC140477.2-201ENSMUST00000222037 322 ntBASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 AC167192.2-201ENSMUST00000224794 198 ntBASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Snora9-201ENSMUST00000082579 133 ntBASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 n-R5s92-201ENSMUST00000082810 119 ntBASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Fam45a-201ENSMUST00000025957 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Nr3c1-202ENSMUST00000097592 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 AU022252-203ENSMUST00000141112 7151 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Mblac2-201ENSMUST00000057598 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Zim1-202ENSMUST00000122432 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Gm7103-201ENSMUST00000195642 1852 ntBASIC10.47□□□□□ -0.73
Nkx1-1G3UXB3 Gm37170-201ENSMUST00000194488 1934 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx1-1G3UXB3 Sardh-202ENSMUST00000102886 4521 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx1-1G3UXB3 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx1-1G3UXB3 Gm36879-201ENSMUST00000212313 2060 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx1-1G3UXB3 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx1-1G3UXB3 AC161884.1-201ENSMUST00000225436 2174 ntBASIC10.46□□□□□ -0.73
Nkx1-1G3UXB3 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.46□□□□□ -0.73
Nkx1-1G3UXB3 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx1-1G3UXB3 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx1-1G3UXB3 Kdm4a-203ENSMUST00000106403 4536 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx1-1G3UXB3 Hist4h4-201ENSMUST00000179285 2863 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Nkx1-1G3UXB3 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx1-1G3UXB3 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.46□□□□□ -0.73
Nkx1-1G3UXB3 Fbxo34-202ENSMUST00000095941 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx1-1G3UXB3 Cfap65-201ENSMUST00000094844 5727 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx1-1G3UXB3 Spata32-201ENSMUST00000103076 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx1-1G3UXB3 Gm24482-201ENSMUST00000117005 93 ntBASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms