Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm11997-201ENSMUST00000118697 313 ntBASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Gm7212-201ENSMUST00000120817 348 ntBASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Gm7599-201ENSMUST00000121453 796 ntBASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Gm16150-201ENSMUST00000127620 437 ntTSL 5 BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Gm16174-201ENSMUST00000137373 402 ntTSL 2 BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Gm11789-205ENSMUST00000148579 649 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Gm24685-201ENSMUST00000157764 285 ntBASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Gm25432-201ENSMUST00000158284 66 ntBASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Gm19840-201ENSMUST00000169624 882 ntBASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Gm3383-203ENSMUST00000178414 780 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Gm3194-201ENSMUST00000180143 780 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Gm6100-201ENSMUST00000180253 403 ntBASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Gm26915-201ENSMUST00000183080 748 ntBASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Gm8004-201ENSMUST00000187782 617 ntBASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Tdpoz2-201ENSMUST00000191960 1145 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 4933403L11Rik-201ENSMUST00000193857 1121 ntBASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Gm8010-201ENSMUST00000194128 873 ntBASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Gm42952-206ENSMUST00000199324 506 ntTSL 3 BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Gm9497-201ENSMUST00000199908 538 ntBASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Gm16273-201ENSMUST00000202238 268 ntBASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Gm44306-201ENSMUST00000203058 203 ntBASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Gm20074-201ENSMUST00000208144 484 ntBASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Gm7368-201ENSMUST00000213307 367 ntBASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Gm6841-201ENSMUST00000220602 598 ntBASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Gm35514-201ENSMUST00000221615 352 ntTSL 5 BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Gm46379-201ENSMUST00000222551 265 ntBASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Rpl7a-ps1-201ENSMUST00000223350 793 ntBASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Olfr51-201ENSMUST00000076514 924 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Gm25129-201ENSMUST00000082651 133 ntBASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 AC154141.1-201ENSMUST00000208403 4136 ntBASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Slc51a-201ENSMUST00000042042 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Slc25a5-ps-203ENSMUST00000223928 1442 ntBASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Gm45263-201ENSMUST00000210377 1375 ntBASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Pcdh1F7BJK1 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Pcdh1F7BJK1 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC6.81□□□□□ -1.32
Pcdh1F7BJK1 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Pcdh1F7BJK1 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Pcdh1F7BJK1 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Pcdh1F7BJK1 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Pcdh1F7BJK1 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Pcdh1F7BJK1 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Pcdh1F7BJK1 AC112680.1-201ENSMUST00000215435 1349 ntBASIC6.81□□□□□ -1.32
Pcdh1F7BJK1 Zfp809-205ENSMUST00000215618 1313 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Pcdh1F7BJK1 AC154552.6-201ENSMUST00000221365 1342 ntBASIC6.81□□□□□ -1.32
Pcdh1F7BJK1 Olfr1491-202ENSMUST00000214007 1675 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Pcdh1F7BJK1 Olfr1491-203ENSMUST00000215493 1675 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Pcdh1F7BJK1 Olfr1491-205ENSMUST00000216377 1678 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Pcdh1F7BJK1 Gm10693-201ENSMUST00000144146 2037 ntBASIC6.81□□□□□ -1.32
Pcdh1F7BJK1 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Pcdh1F7BJK1 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Pcdh1F7BJK1 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Pcdh1F7BJK1 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Pcdh1F7BJK1 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Pcdh1F7BJK1 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Pcdh1F7BJK1 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Pcdh1F7BJK1 Ighv1-67-201ENSMUST00000103538 294 ntBASIC6.81□□□□□ -1.32
Pcdh1F7BJK1 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Pcdh1F7BJK1 Gm14056-201ENSMUST00000117198 642 ntBASIC6.81□□□□□ -1.32
Pcdh1F7BJK1 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC6.81□□□□□ -1.32
Pcdh1F7BJK1 Gm15000-201ENSMUST00000118275 1243 ntBASIC6.81□□□□□ -1.32
Pcdh1F7BJK1 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC6.81□□□□□ -1.32
Pcdh1F7BJK1 Gm11474-201ENSMUST00000120814 277 ntBASIC6.81□□□□□ -1.32
Pcdh1F7BJK1 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC6.81□□□□□ -1.32
Pcdh1F7BJK1 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC6.81□□□□□ -1.32
Pcdh1F7BJK1 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC6.81□□□□□ -1.32
Pcdh1F7BJK1 Gm14242-201ENSMUST00000145204 375 ntTSL 5 BASIC6.81□□□□□ -1.32
Pcdh1F7BJK1 1700060C16Rik-201ENSMUST00000150559 645 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms