Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm18879-201ENSMUST00000221187 1537 ntBASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 C130071C03Rik-201ENSMUST00000131907 3590 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Fmo5-202ENSMUST00000107049 2583 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Papss2-201ENSMUST00000025833 3635 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Cnot2-204ENSMUST00000164088 2618 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Pcbp2-202ENSMUST00000078404 2829 ntTSL 2 BASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Mir697-201ENSMUST00000102316 109 ntBASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Gm7146-201ENSMUST00000116079 739 ntBASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Ighv1-3-201ENSMUST00000192764 302 ntBASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 AC154431.2-201ENSMUST00000225215 1055 ntBASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Gm12183-201ENSMUST00000120566 1848 ntBASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Gm43679-201ENSMUST00000197051 3677 ntBASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 5330413P13Rik-202ENSMUST00000143453 3630 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Dis3l-202ENSMUST00000113890 3224 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Gm5949-201ENSMUST00000213468 1421 ntBASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
Col6a3E9PWQ3 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC6.77□□□□□ -1.32
Col6a3E9PWQ3 Pdgfd-201ENSMUST00000058692 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.32
Col6a3E9PWQ3 Mir449c-201ENSMUST00000102192 109 ntBASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Gm22657-201ENSMUST00000104197 132 ntBASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Gm13473-201ENSMUST00000119289 367 ntBASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Gm13077-201ENSMUST00000121941 484 ntBASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Gm44837-201ENSMUST00000206863 717 ntBASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 AC131117.2-203ENSMUST00000225886 950 ntBASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Myo15-202ENSMUST00000081823 7953 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Gm12661-201ENSMUST00000118780 3335 ntBASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Gm35808-201ENSMUST00000204769 2602 ntBASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Gm44121-201ENSMUST00000205169 2006 ntBASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Gm42822-201ENSMUST00000200507 1529 ntBASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Gm25758-201ENSMUST00000103987 129 ntBASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Gm13455-201ENSMUST00000118767 517 ntBASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Gm22367-201ENSMUST00000178930 132 ntBASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Gm27985-201ENSMUST00000185112 378 ntBASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Gm44456-201ENSMUST00000196554 89 ntBASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Gm2840-201ENSMUST00000048361 411 ntBASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 AC165260.6-206ENSMUST00000223884 3698 ntBASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Gm37949-201ENSMUST00000192808 2091 ntBASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Ctns-202ENSMUST00000108476 2723 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Gm10862-201ENSMUST00000193956 3350 ntBASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Hal-202ENSMUST00000129421 5319 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Gm26372-201ENSMUST00000157831 236 ntBASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 AC122459.2-201ENSMUST00000227099 638 ntBASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Mir143-201ENSMUST00000083511 63 ntBASIC6.77□□□□□ -1.33
Col6a3E9PWQ3 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms