Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm7512-201ENSMUST00000195217 1170 ntBASIC6.8□□□□□ -1.32
Upk3aQ9JKX8 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC6.8□□□□□ -1.32
Upk3aQ9JKX8 Gm18430-201ENSMUST00000197534 682 ntBASIC6.8□□□□□ -1.32
Upk3aQ9JKX8 Gm2221-201ENSMUST00000209342 418 ntBASIC6.8□□□□□ -1.32
Upk3aQ9JKX8 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC6.8□□□□□ -1.32
Upk3aQ9JKX8 Gm45739-201ENSMUST00000213094 388 ntBASIC6.8□□□□□ -1.32
Upk3aQ9JKX8 Gm46231-201ENSMUST00000220152 314 ntBASIC6.8□□□□□ -1.32
Upk3aQ9JKX8 AC127242.3-201ENSMUST00000222009 580 ntBASIC6.8□□□□□ -1.32
Upk3aQ9JKX8 AC165157.1-201ENSMUST00000222981 580 ntBASIC6.8□□□□□ -1.32
Upk3aQ9JKX8 AC124489.1-201ENSMUST00000225852 526 ntBASIC6.8□□□□□ -1.32
Upk3aQ9JKX8 AC156790.1-201ENSMUST00000226572 559 ntBASIC6.8□□□□□ -1.32
Upk3aQ9JKX8 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Upk3aQ9JKX8 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Upk3aQ9JKX8 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Upk3aQ9JKX8 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Upk3aQ9JKX8 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Upk3aQ9JKX8 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Upk3aQ9JKX8 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC6.8□□□□□ -1.32
Upk3aQ9JKX8 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Upk3aQ9JKX8 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Upk3aQ9JKX8 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Upk3aQ9JKX8 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Upk3aQ9JKX8 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC6.8□□□□□ -1.32
Upk3aQ9JKX8 AC158988.1-201ENSMUST00000226731 2624 ntBASIC6.8□□□□□ -1.32
Upk3aQ9JKX8 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Gm42668-201ENSMUST00000200747 2487 ntBASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Gm37877-201ENSMUST00000191630 2709 ntBASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Gm14802-201ENSMUST00000121944 1885 ntBASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Gm16506-201ENSMUST00000165553 1405 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Gm14904-201ENSMUST00000117067 335 ntBASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Gm14745-201ENSMUST00000118480 1096 ntBASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Gm15081-201ENSMUST00000119794 844 ntBASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Ighv1-17-201ENSMUST00000194435 350 ntBASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Gm2860-201ENSMUST00000199226 707 ntBASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Gm45725-201ENSMUST00000212962 337 ntBASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Gm5119-201ENSMUST00000215858 634 ntBASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 AL713985.1-201ENSMUST00000219030 420 ntBASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 AC163660.1-201ENSMUST00000223696 818 ntBASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 AC159188.3-201ENSMUST00000224199 880 ntBASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 AC108947.1-201ENSMUST00000224274 1000 ntBASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 CT009711.2-202ENSMUST00000224538 973 ntBASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Gm37940-201ENSMUST00000194243 3251 ntBASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Gm5512-202ENSMUST00000220222 1522 ntBASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Gm43113-201ENSMUST00000199713 1754 ntBASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Upk3aQ9JKX8 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Gm2694-201ENSMUST00000180700 2314 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Gm36933-201ENSMUST00000194945 3071 ntBASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Gm37653-201ENSMUST00000195401 3578 ntBASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Upk3aQ9JKX8 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms